RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 TRMT10AQ8TBZ6 339 aaKnown RBP9.2□□□□□ -0.94
SS18-217ENST00000580958 OR51E1Q8TCB6 317 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 SPTSSAQ969W0 71 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 DIRAS2Q96HU8 199 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 SOX7Q9BT81 388 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 REPIN1Q9BWE0 567 aaKnown RBP9.2□□□□□ -0.94
SS18-217ENST00000580958 PALMDQ9NP74 551 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 GPR84Q9NQS5 396 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 SLC17A5Q9NRA2 495 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 TAS2R4Q9NYW5 299 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 ZNF319Q9P2F9 582 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 ADAM30Q9UKF2 790 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 TIMM10BQ9Y5J6 103 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 V9GY05 133 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 BSNQ9UPA5 3926 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 ARPC4-TTLL3A0A0A6YYG9 625 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 ANXA2P2A6NMY6 339 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 AHRRA9YTQ3 701 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 FAM25AB3EWG3 89 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 FAM25CB3EWG5 89 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 FAM25GB3EWG6 89 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 E9PLN8 166 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 M0R135 149 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 TBX1O43435 398 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 PAHP00439 452 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 APOC1P02654 83 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 TPOP07202 933 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 ITGA5P08648 1049 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 SNRPBP14678 240 aaKnown RBP9.19□□□□□ -0.94
SS18-217ENST00000580958 IGFBP3P17936 291 aaPredicted RBP9.19□□□□□ -0.94
SS18-217ENST00000580958 CRYGSP22914 178 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 OTX1P32242 354 aaPredicted RBP9.19□□□□□ -0.94
SS18-217ENST00000580958 TPTEP56180 551 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 GUSBP1Q15486 140 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 GFOD2Q3B7J2 385 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 KRTAP27-1Q3LI81 207 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 PABPC1L2AQ5JQF8 200 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 FBXW9Q5XUX1 488 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 FAM131AQ6UXB0 335 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 ZNF627Q7L945 461 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 ABHD12BQ7Z5M8 362 aaPredicted RBP9.19□□□□□ -0.94
SS18-217ENST00000580958 COMMD2Q86X83 199 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 CNEP1R1Q8N9A8 125 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 Q8NA96 180 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 OR1J2Q8NGS2 313 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 FGGYQ96C11 551 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 ZNF799Q96GE5 643 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 WACQ9BTA9 647 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 RNF121Q9H920 327 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 ZNF275Q9NSD4 429 aaPredicted RBP9.19□□□□□ -0.94
SS18-217ENST00000580958 ZNF224Q9NZL3 707 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 ABRACLQ9P1F3 81 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 V9GYH0 126 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 PIEZO2Q9H5I5 2752 aa9.19□□□□□ -0.94
SS18-217ENST00000580958 MAP1BP46821 2468 aaKnown RBP9.19□□□□□ -0.94
SS18-217ENST00000580958 SPENQ96T58 3664 aaKnown RBP9.18□□□□□ -0.94
SS18-217ENST00000580958 IFITM5A6NNB3 132 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 C1QTNF9BB2RNN3 333 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 AIPO00170 330 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 SLC19A2O60779 497 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 HLA-HP01893 362 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 EIF4EP06730 217 aaKnown RBP9.18□□□□□ -0.94
SS18-217ENST00000580958 FAM87AP0C7U9 286 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 C1QTNF9P0C862 333 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 ABOP16442 354 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 ELK1P19419 428 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 FSTP19883 344 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 CCL1P22362 96 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 AZGP1P25311 298 aaKnown RBP9.18□□□□□ -0.94
SS18-217ENST00000580958 MPGP29372 298 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 SMCPP49901 116 aaPredicted RBP9.18□□□□□ -0.94
SS18-217ENST00000580958 IFITM3Q01628 133 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 HGFACQ04756 655 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 LINC00303Q3SY05 128 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 SLC36A2Q495M3 483 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 C1orf185Q5T7R7 199 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 NSUN5P2Q63ZY6 315 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 OR2A2Q6IF42 318 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 TMEM53Q6P2H8 277 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 VWA1Q6PCB0 445 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 DRAM2Q6UX65 266 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 TFAP2EQ6VUC0 442 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 DOK3Q7L591 496 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 FAM214BQ7L5A3 538 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 SAMD12Q8N8I0 201 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 OR1K1Q8NGR3 316 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 ZNF671Q8TAW3 534 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 LGALS14Q8TCE9 139 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 FAM71F1Q96KD3 344 aaPredicted RBP9.18□□□□□ -0.94
SS18-217ENST00000580958 SDHCQ99643 169 aaPredicted RBP9.18□□□□□ -0.94
SS18-217ENST00000580958 NOX3Q9HBY0 568 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 ABCB10Q9NRK6 738 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 CKLFQ9UBR5 152 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 MALT1Q9UDY8 824 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 FOXJ3Q9UPW0 622 aa9.18□□□□□ -0.94
SS18-217ENST00000580958 DMXL2Q8TDJ6 3036 aa9.17□□□□□ -0.94
SS18-217ENST00000580958 ZNF503-AS2A6NEH8 195 aa9.17□□□□□ -0.94
SS18-217ENST00000580958 FABP12A6NFH5 140 aa9.17□□□□□ -0.94
SS18-217ENST00000580958 A6NIN4 97 aa9.17□□□□□ -0.94
SS18-217ENST00000580958 TTLL8A6PVC2 850 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms