RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 DPPA2Q7Z7J5 298 aa16.49■□□□□ 0.23
LIMD2-209ENST00000580222 MDP1Q86V88 176 aa16.49■□□□□ 0.23
LIMD2-209ENST00000580222 ENTHD1Q8IYW4 607 aa16.49■□□□□ 0.23
LIMD2-209ENST00000580222 OR51F2Q8NH61 342 aa16.49■□□□□ 0.23
LIMD2-209ENST00000580222 YIPF5Q969M3 257 aa16.49■□□□□ 0.23
LIMD2-209ENST00000580222 UBE2FQ969M7 185 aa16.49■□□□□ 0.23
LIMD2-209ENST00000580222 ZNF416Q9BWM5 594 aa16.49■□□□□ 0.23
LIMD2-209ENST00000580222 ZNF224Q9NZL3 707 aa16.49■□□□□ 0.23
LIMD2-209ENST00000580222 COMMD3-BMI1R4GMX3 469 aa16.49■□□□□ 0.23
LIMD2-209ENST00000580222 ZNF503-AS2A6NEH8 195 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 CCDC182A6NF36 153 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 SLC22A31A6NKX4 558 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 TFP02787 698 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 PATE4P0C8F1 98 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 PCBD1P61457 104 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 SNRPGP62308 76 aaKnown RBP16.48■□□□□ 0.23
LIMD2-209ENST00000580222 LSM6P62312 80 aaKnown RBP16.48■□□□□ 0.23
LIMD2-209ENST00000580222 PIGFQ07326 219 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 IL18R1Q13478 541 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 AQP6Q13520 282 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 KCNMB1Q16558 191 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 MEPCEQ7L2J0 689 aaKnown RBP16.48■□□□□ 0.23
LIMD2-209ENST00000580222 C1QL2Q7Z5L3 287 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 ERI1Q8IV48 349 aaKnown RBP16.48■□□□□ 0.23
LIMD2-209ENST00000580222 C8orf59Q8N0T1 100 aaPredicted RBP16.48■□□□□ 0.23
LIMD2-209ENST00000580222 ZNF511Q8NB15 262 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 FGFBP3Q8TAT2 258 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 ZNF582Q96NG8 517 aaPredicted RBP16.48■□□□□ 0.23
LIMD2-209ENST00000580222 CDADC1Q9BWV3 514 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 UNKLQ9H9P5 680 aaKnown RBP16.48■□□□□ 0.23
LIMD2-209ENST00000580222 NOX3Q9HBY0 568 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 MRPL22Q9NWU5 206 aaKnown RBP16.48■□□□□ 0.23
LIMD2-209ENST00000580222 FBXO9Q9UK97 447 aaPredicted RBP16.48■□□□□ 0.23
LIMD2-209ENST00000580222 ZNF281Q9Y2X9 895 aa16.48■□□□□ 0.23
LIMD2-209ENST00000580222 TRAV20A0A0B4J274 112 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 IGHV2OR16-5A0A0B4J2B6 119 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 ZNF32P17041 273 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 PAX7P23759 505 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 RAB1AP62820 205 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 MEDAGQ5VYS4 303 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 OR6N2Q8NGY6 317 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 TFAP2CQ92754 450 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 RFKQ969G6 155 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 DUX5Q96PT3 197 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 INTS14Q96SY0 518 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 MOV10Q9HCE1 1003 aaKnown RBP16.47■□□□□ 0.23
LIMD2-209ENST00000580222 CLN6Q9NWW5 311 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 ASH2LQ9UBL3 628 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 AASSQ9UDR5 926 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 KCNG2Q9UJ96 466 aa16.47■□□□□ 0.23
LIMD2-209ENST00000580222 IGKV3-15P01624 115 aa16.46■□□□□ 0.23
LIMD2-209ENST00000580222 SPARCP09486 303 aa16.46■□□□□ 0.23
LIMD2-209ENST00000580222 ARR3P36575 388 aa16.46■□□□□ 0.23
LIMD2-209ENST00000580222 ENTPD1P49961 510 aa16.46■□□□□ 0.23
LIMD2-209ENST00000580222 SCRN3Q0VDG4 424 aa16.46■□□□□ 0.23
LIMD2-209ENST00000580222 MAD2L1BPQ15013 274 aaPredicted RBP16.46■□□□□ 0.23
LIMD2-209ENST00000580222 OCLNQ16625 522 aa16.46■□□□□ 0.23
LIMD2-209ENST00000580222 C3orf36Q3SXR2 165 aa16.46■□□□□ 0.23
LIMD2-209ENST00000580222 LINC00346Q8IVM7 164 aa16.46■□□□□ 0.23
LIMD2-209ENST00000580222 OR2AJ1Q8NGZ0 328 aa16.46■□□□□ 0.23
LIMD2-209ENST00000580222 RHOXF1Q8NHV9 184 aa16.46■□□□□ 0.23
LIMD2-209ENST00000580222 TEAD3Q99594 435 aa16.46■□□□□ 0.23
LIMD2-209ENST00000580222 WACQ9BTA9 647 aa16.46■□□□□ 0.23
LIMD2-209ENST00000580222 MRPL37Q9BZE1 423 aaKnown RBP16.46■□□□□ 0.23
LIMD2-209ENST00000580222 WDR76Q9H967 626 aa16.46■□□□□ 0.23
LIMD2-209ENST00000580222 ZNF275Q9NSD4 429 aaPredicted RBP16.46■□□□□ 0.23
LIMD2-209ENST00000580222 B3GNT2Q9NY97 397 aa16.46■□□□□ 0.23
LIMD2-209ENST00000580222 SNTNA6NMZ2 147 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 SELENOFO60613 162 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 ENTPD6O75354 484 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 MRPL3P09001 348 aaKnown RBP16.45■□□□□ 0.22
LIMD2-209ENST00000580222 MMP7P09237 267 aaPredicted RBP16.45■□□□□ 0.22
LIMD2-209ENST00000580222 GNAO1P09471 354 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 CBR1P16152 277 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 GABRB1P18505 474 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 HTR1FP30939 366 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 NAA10P41227 235 aaPredicted RBP16.45■□□□□ 0.22
LIMD2-209ENST00000580222 RPS27P42677 84 aaKnown RBP16.45■□□□□ 0.22
LIMD2-209ENST00000580222 SYT9Q86SS6 491 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 Q96MT0 163 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 ZNF184Q99676 751 aaPredicted RBP16.45■□□□□ 0.22
LIMD2-209ENST00000580222 MARCH7Q9H992 704 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 WARS2Q9UGM6 360 aaKnown RBP16.45■□□□□ 0.22
LIMD2-209ENST00000580222 OPN4Q9UHM6 478 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 FBXL3Q9UKT7 428 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.45■□□□□ 0.22
LIMD2-209ENST00000580222 TIMM10BQ9Y5J6 103 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 LHFPL6Q9Y693 200 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 HSPE1-MOB4S4R3N1 261 aa16.45■□□□□ 0.22
LIMD2-209ENST00000580222 IQCMA0A1B0GVH7 501 aa16.44■□□□□ 0.22
LIMD2-209ENST00000580222 PLPP2O43688 288 aa16.44■□□□□ 0.22
LIMD2-209ENST00000580222 RP2O75695 350 aa16.44■□□□□ 0.22
LIMD2-209ENST00000580222 NCR1O76036 304 aa16.44■□□□□ 0.22
LIMD2-209ENST00000580222 FSHBP01225 129 aa16.44■□□□□ 0.22
LIMD2-209ENST00000580222 ALDH3B1P43353 468 aa16.44■□□□□ 0.22
LIMD2-209ENST00000580222 PLP2Q04941 152 aa16.44■□□□□ 0.22
LIMD2-209ENST00000580222 RAB39AQ14964 217 aa16.44■□□□□ 0.22
LIMD2-209ENST00000580222 PABPC1L2AQ5JQF8 200 aa16.44■□□□□ 0.22
LIMD2-209ENST00000580222 SLC25A30Q5SVS4 291 aa16.44■□□□□ 0.22
LIMD2-209ENST00000580222 KRT80Q6KB66 452 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms