RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 LIPT2A6NK58 231 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 SYT7O43581 403 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 GLAP06280 429 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 SFTPCP11686 197 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 DHPSP49366 369 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 CCL7P80098 99 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 UNC119Q13432 240 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 C3orf33Q6P1S2 294 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 BPIFB2Q8N4F0 458 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 OR10H5Q8NGA6 315 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 OR6M1Q8NGM8 313 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 C15orf40Q8WUR7 153 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 PNPLA2Q96AD5 504 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF775Q96BV0 537 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 FAM71F1Q96KD3 344 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 UTP23Q9BRU9 249 aaKnown RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 NICN1Q9BSH3 213 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 CRB3Q9BUF7 120 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 TAS2R8Q9NYW2 309 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF319Q9P2F9 582 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 ASH2LQ9UBL3 628 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 OR6C76A6NM76 312 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 FOSL2P15408 326 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 PPP3CBP16298 524 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 DAP3P51398 398 aaKnown RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF41P51814 821 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 FAM74A1Q5RGS3 127 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 ATPAF1Q5TC12 328 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 PTCRAQ6ISU1 281 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 RHOUQ7L0Q8 258 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 FJX1Q86VR8 437 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 PAQR4Q8N4S7 273 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 OR5D18Q8NGL1 313 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 POC1BQ8TC44 478 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 CASTOR1Q8WTX7 329 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 SELENOIQ9C0D9 397 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 PBOV1Q9GZY1 135 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 BANF2Q9H503 90 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF768Q9H5H4 540 aaKnown RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 COA4Q9NYJ1 87 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 KLHL13Q9P2N7 655 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 GDF2Q9UK05 429 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 FAM186AA6NE01 2351 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 GPR179Q6PRD1 2367 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 IGHV3-15A0A0B4J1V0 119 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 A0A1B0GTQ1 180 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 RRASP10301 218 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 S100A11P31949 105 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 HOXA1P49639 335 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 PRSS12P56730 875 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 CXADRP78310 365 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 TMEM176BQ3YBM2 270 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 NHLRC3Q5JS37 347 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 PHF19Q5T6S3 580 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 TRAPPC6BQ86SZ2 158 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 NAA40Q86UY6 237 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF454Q8N9F8 522 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 BOLLQ8N9W6 283 aaKnown RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 MFSD8Q8NHS3 518 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 SLC39A7Q92504 469 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 DDIT4LQ96D03 193 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 MS4A7Q9GZW8 240 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-209ENST00000580095 FAM206AQ9NX38 181 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 OCIAD1Q9NX40 245 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 PLEKHA6Q9Y2H5 1048 aa9.32□□□□□ -0.92
TOP3A-209ENST00000580095 SNAPINO95295 136 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 IGHMP01871 453 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 CLRN1P58418 232 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 TAS2R19P59542 299 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 ACTBP60709 375 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 ACTG1P63261 375 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 BAMBIQ13145 260 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 LY6G6FQ5SQ64 297 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 WDR74Q6RFH5 385 aaPredicted RBP9.31□□□□□ -0.92
TOP3A-209ENST00000580095 ABHD12BQ7Z5M8 362 aaPredicted RBP9.31□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF101Q8IZC7 436 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 TMEM104Q8NE00 496 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 OR13C8Q8NGS7 320 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 RNF133Q8WVZ7 376 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 OIT3Q8WWZ8 545 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 PRR13Q9NZ81 148 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 MYOTQ9UBF9 498 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 LHFPL6Q9Y693 200 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 NCOR1O75376 2440 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 A6NIZ1 184 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 RAB27BO00194 218 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 SIGLEC6O43699 453 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 ITGB2P05107 769 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 ACHEP22303 614 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 APOBEC1P41238 236 aaKnown RBP9.31□□□□□ -0.92
TOP3A-209ENST00000580095 RAP1BP61224 184 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 RAP1AP62834 184 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 DHRS2Q13268 280 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF813Q6ZN06 617 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 ZNF584Q8IVC4 421 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 STEAP2Q8NFT2 490 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 ST8SIA1Q92185 356 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 LINC00052Q96N35 136 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 MFFQ9GZY8 342 aa9.31□□□□□ -0.92
TOP3A-209ENST00000580095 VSIG4Q9Y279 399 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms