RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 SLC29A1Q99808 456 aa13.92□□□□□ -0.18
RARA-209ENST00000579727 USE1Q9NZ43 259 aa13.92□□□□□ -0.18
RARA-209ENST00000579727 TREM2Q9NZC2 230 aa13.92□□□□□ -0.18
RARA-209ENST00000579727 ORC6Q9Y5N6 252 aa13.92□□□□□ -0.18
RARA-209ENST00000579727 COL6A5A8TX70 2615 aa13.92□□□□□ -0.18
RARA-209ENST00000579727 A0A096LNT2 108 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 LY6G6DO95868 133 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 LYNP07948 512 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 SLC25A16P16260 332 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 HSD11B1P28845 292 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 OTX1P32242 354 aaPredicted RBP13.91□□□□□ -0.18
RARA-209ENST00000579727 RBMXP38159 391 aaKnown RBP13.91□□□□□ -0.18
RARA-209ENST00000579727 CX3CR1P49238 355 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 MOGQ16653 247 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 SPRNQ5BIV9 151 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 LCN1P1Q5VSP4 162 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 AADACL4Q5VUY2 407 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 CLEC9AQ6UXN8 241 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 Q6ZR03 302 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 COLCA1Q6ZS62 124 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 OR5L1Q8NGL2 311 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 OTOSQ8NHW6 89 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 FAM81AQ8TBF8 368 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 RNF133Q8WVZ7 376 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 HAVCR1Q96D42 359 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 MBOAT4Q96T53 435 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 KCNJ15Q99712 375 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 C9orf16Q9BUW7 83 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 BPESC1Q9GZL8 116 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 MYOZ1Q9NP98 299 aaPredicted RBP13.91□□□□□ -0.18
RARA-209ENST00000579727 BRD7Q9NPI1 651 aa13.91□□□□□ -0.18
RARA-209ENST00000579727 LOC390937A0A1W2PQ73 354 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 KIAA1324LA8MWY0 1029 aaPredicted RBP13.9□□□□□ -0.18
RARA-209ENST00000579727 VWC2LB2RUY7 222 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 J3QW42 95 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 PSMD9O00233 223 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 TBX1O43435 398 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 LILRA1O75019 489 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 ANXA2P07355 339 aaKnown RBP13.9□□□□□ -0.18
RARA-209ENST00000579727 H2BFMP0C1H6 154 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 KITLGP21583 273 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 NR4A2P43354 598 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 RAD23AP54725 363 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 EFNB1P98172 346 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 GK2Q14410 553 aaPredicted RBP13.9□□□□□ -0.18
RARA-209ENST00000579727 NXNL2Q5VZ03 156 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 DRAM2Q6UX65 266 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 LRRN1Q6UXK5 716 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 FBXW12Q6X9E4 464 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 MEPCEQ7L2J0 689 aaKnown RBP13.9□□□□□ -0.18
RARA-209ENST00000579727 SLC16A9Q7RTY1 509 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 BIVMQ86UB2 503 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 PRIMA1Q86XR5 153 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 ZNF786Q8N393 782 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 RFLNBQ8N5W9 214 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 UBE2FQ969M7 185 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 EME1Q96AY2 570 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 TOR3AQ9H497 397 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 DECR2Q9NUI1 292 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 H2AFY2Q9P0M6 372 aaPredicted RBP13.9□□□□□ -0.18
RARA-209ENST00000579727 LAMP5Q9UJQ1 280 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 COPS3Q9UNS2 423 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 CACNG2Q9Y698 323 aa13.9□□□□□ -0.18
RARA-209ENST00000579727 IGHV4-61A0A0C4DH41 118 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 APOL3O95236 402 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 RAC2P15153 192 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 TUBG1P23258 451 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 OPRL1P41146 370 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 GRB2P62993 217 aaKnown RBP13.89□□□□□ -0.19
RARA-209ENST00000579727 MALLQ13021 153 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 RCN1Q15293 331 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 TRIP10Q15642 601 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 GFOD2Q3B7J2 385 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 PCGF3Q3KNV8 242 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 GLYATL3Q5SZD4 288 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 ZBTB49Q6ZSB9 765 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 USP51Q70EK9 711 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 OR2Z1Q8NG97 314 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 OR10AD1Q8NGE0 317 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 RDH5Q92781 318 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 CNN2Q99439 309 aaKnown RBP13.89□□□□□ -0.19
RARA-209ENST00000579727 SAP30LQ9HAJ7 183 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 TUBG2Q9NRH3 451 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 CYSLTR2Q9NS75 346 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 ZNF275Q9NSD4 429 aaPredicted RBP13.89□□□□□ -0.19
RARA-209ENST00000579727 TANC2Q9HCD6 1990 aa13.89□□□□□ -0.19
RARA-209ENST00000579727 PRR32B1ATL7 298 aa13.88□□□□□ -0.19
RARA-209ENST00000579727 H0YL77 283 aa13.88□□□□□ -0.19
RARA-209ENST00000579727 NDUFS8O00217 210 aa13.88□□□□□ -0.19
RARA-209ENST00000579727 SLC15A1P46059 708 aa13.88□□□□□ -0.19
RARA-209ENST00000579727 CDC42P60953 191 aa13.88□□□□□ -0.19
RARA-209ENST00000579727 TNFAIP6P98066 277 aaPredicted RBP13.88□□□□□ -0.19
RARA-209ENST00000579727 ZNF92Q03936 586 aa13.88□□□□□ -0.19
RARA-209ENST00000579727 KRTAP1-1Q07627 177 aa13.88□□□□□ -0.19
RARA-209ENST00000579727 LRRC36Q1X8D7 754 aa13.88□□□□□ -0.19
RARA-209ENST00000579727 LPCAT4Q643R3 524 aa13.88□□□□□ -0.19
RARA-209ENST00000579727 FAM57BQ71RH2 274 aa13.88□□□□□ -0.19
RARA-209ENST00000579727 PGAP1Q75T13 922 aa13.88□□□□□ -0.19
RARA-209ENST00000579727 MRPL21Q7Z2W9 205 aaKnown RBP13.88□□□□□ -0.19
RARA-209ENST00000579727 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms