RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 SPRY1O43609 319 aaPredicted RBP13.6□□□□□ -0.23
VAPA-204ENST00000577901 TIMM8AO60220 97 aaPredicted RBP13.6□□□□□ -0.23
VAPA-204ENST00000577901 RGS9O75916 674 aaPredicted RBP13.6□□□□□ -0.23
VAPA-204ENST00000577901 GLCEO94923 617 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 ZNF81P51508 661 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 ACTG1P63261 375 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 MRPS11P82912 194 aaKnown RBP13.6□□□□□ -0.23
VAPA-204ENST00000577901 ZMAT1Q5H9K5 638 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 TEX30Q5JUR7 227 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 TMEM236Q5W0B7 351 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 ZFP1Q6P2D0 407 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 PLBD1Q6P4A8 553 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 ZNF418Q8TF45 676 aaPredicted RBP13.6□□□□□ -0.23
VAPA-204ENST00000577901 PYDC1Q8WXC3 89 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 SPTSSAQ969W0 71 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 MAP6Q96JE9 813 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 PRRG3Q9BZD7 231 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 GABARAPL1Q9H0R8 117 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 SEMA6AQ9H2E6 1030 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 MED20Q9H944 212 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 DECR2Q9NUI1 292 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 NKIRAS2Q9NYR9 191 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 TVP23BQ9NYZ1 205 aa13.6□□□□□ -0.23
VAPA-204ENST00000577901 TPD52L2O43399 206 aaKnown RBP13.59□□□□□ -0.23
VAPA-204ENST00000577901 GSTT1P30711 240 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 RPS27P42677 84 aaKnown RBP13.59□□□□□ -0.23
VAPA-204ENST00000577901 MAGEB1P43366 347 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 TPTEP56180 551 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 LMO4P61968 165 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 PSG7Q13046 419 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 PTGES3Q15185 160 aaKnown RBP13.59□□□□□ -0.23
VAPA-204ENST00000577901 TAF13Q15543 124 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 SNAPC1Q16533 368 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 PCK2Q16822 640 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 LINC01590Q5TEZ4 76 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 FAHD2BQ6P2I3 314 aaPredicted RBP13.59□□□□□ -0.23
VAPA-204ENST00000577901 LYPD4Q6UWN0 246 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 DCXRQ7Z4W1 244 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 CMBLQ96DG6 245 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 FAHD2AQ96GK7 314 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 INTS14Q96SY0 518 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 HCAR1Q9BXC0 346 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 PNRC2Q9NPJ4 139 aaKnown RBP13.59□□□□□ -0.23
VAPA-204ENST00000577901 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.59□□□□□ -0.23
VAPA-204ENST00000577901 ZDHHC8Q9ULC8 765 aa13.59□□□□□ -0.23
VAPA-204ENST00000577901 TRAV20A0A0B4J274 112 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 PRODHO43272 600 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 WIPF1O43516 503 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 SPRY3O43610 288 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 RP2O75695 350 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 NCR1O76036 304 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 ACSM4P0C7M7 580 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 RAC2P15153 192 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 COMPP49747 757 aaPredicted RBP13.58□□□□□ -0.24
VAPA-204ENST00000577901 MMP15P51511 669 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 CCL8P80075 99 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 RSPO1Q2MKA7 263 aaPredicted RBP13.58□□□□□ -0.24
VAPA-204ENST00000577901 KRTAP27-1Q3LI81 207 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 KLHL12Q53G59 568 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 SLC35D3Q5M8T2 416 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 KDM4DQ6B0I6 523 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 SHFQ7M4L6 423 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 ERI1Q8IV48 349 aaKnown RBP13.58□□□□□ -0.24
VAPA-204ENST00000577901 CPOQ8IVL8 374 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 C3orf56Q8N813 242 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 HAVCR1Q96D42 359 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 DIRC2Q96SL1 478 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 OSBPL10Q9BXB5 764 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 C1QTNF5Q9BXJ0 243 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 POFUT1Q9H488 388 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 CENPMQ9NSP4 180 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 DDX28Q9NUL7 540 aaKnown RBP13.58□□□□□ -0.24
VAPA-204ENST00000577901 PTTG3PQ9NZH4 202 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 PURGQ9UJV8 347 aaKnown RBP13.58□□□□□ -0.24
VAPA-204ENST00000577901 PCDHB10Q9UN67 800 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 BOLA1Q9Y3E2 137 aa13.58□□□□□ -0.24
VAPA-204ENST00000577901 MITFO75030 526 aaPredicted RBP13.57□□□□□ -0.24
VAPA-204ENST00000577901 PNPP00491 289 aa13.57□□□□□ -0.24
VAPA-204ENST00000577901 LCATP04180 440 aa13.57□□□□□ -0.24
VAPA-204ENST00000577901 KITLGP21583 273 aa13.57□□□□□ -0.24
VAPA-204ENST00000577901 SLC15A1P46059 708 aa13.57□□□□□ -0.24
VAPA-204ENST00000577901 RPS7P62081 194 aaKnown RBP13.57□□□□□ -0.24
VAPA-204ENST00000577901 MALLQ13021 153 aa13.57□□□□□ -0.24
VAPA-204ENST00000577901 EIF2B1Q14232 305 aaKnown RBP13.57□□□□□ -0.24
VAPA-204ENST00000577901 TSTQ16762 297 aaKnown RBP13.57□□□□□ -0.24
VAPA-204ENST00000577901 FAM209AQ5JX71 171 aa13.57□□□□□ -0.24
VAPA-204ENST00000577901 COLCA1Q6ZS62 124 aa13.57□□□□□ -0.24
VAPA-204ENST00000577901 PEG10Q86TG7 708 aaKnown RBP13.57□□□□□ -0.24
VAPA-204ENST00000577901 OR6N2Q8NGY6 317 aa13.57□□□□□ -0.24
VAPA-204ENST00000577901 FAM216AQ8WUB2 273 aa13.57□□□□□ -0.24
VAPA-204ENST00000577901 GCDHQ92947 438 aaPredicted RBP13.57□□□□□ -0.24
VAPA-204ENST00000577901 SLAMF6Q96DU3 332 aa13.57□□□□□ -0.24
VAPA-204ENST00000577901 ZMYND19Q96E35 227 aaPredicted RBP13.57□□□□□ -0.24
VAPA-204ENST00000577901 COPS4Q9BT78 406 aa13.57□□□□□ -0.24
VAPA-204ENST00000577901 EGLN1Q9GZT9 426 aa13.57□□□□□ -0.24
VAPA-204ENST00000577901 OAZ3Q9UMX2 235 aa13.57□□□□□ -0.24
VAPA-204ENST00000577901 MEGF8Q7Z7M0 2845 aa13.57□□□□□ -0.24
VAPA-204ENST00000577901 TMEM89A2RUT3 159 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 ZNF878C9JN71 531 aa13.56□□□□□ -0.24
VAPA-204ENST00000577901 TRIM77I1YAP6 450 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms