RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 KCNG2Q9UJ96 466 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 KLHL21Q9UJP4 597 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 ERGIC3Q9Y282 383 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 POLR1DQ9Y2S0 133 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 CHD3Q12873 2000 aaKnown RBP6.81□□□□□ -1.32
CCDC40-215ENST00000576033 OR6C6A6NF89 314 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 PRR23D1E9PI22 279 aaPredicted RBP6.8□□□□□ -1.32
CCDC40-215ENST00000576033 PSMD9O00233 223 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 CCRL2O00421 344 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 MAGEB4O15481 346 aaPredicted RBP6.8□□□□□ -1.32
CCDC40-215ENST00000576033 SYNGR3O43761 229 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 SMPD2O60906 423 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 IFNGP01579 166 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 CRYAAP02489 173 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 SERPINA5P05154 406 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 OR4A8P0C604 315 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 PRR23D2P0DMB1 279 aaPredicted RBP6.8□□□□□ -1.32
CCDC40-215ENST00000576033 CPEP16870 476 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 ZNF182P17025 639 aaPredicted RBP6.8□□□□□ -1.32
CCDC40-215ENST00000576033 NPR2P20594 1047 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 GADD45AP24522 165 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 CRABP1P29762 137 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 ALDH3B1P43353 468 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 FABP6P51161 128 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 SLC25A1P53007 311 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 WNT4P56705 351 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 ADAM8P78325 824 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 RSPO1Q2MKA7 263 aaPredicted RBP6.8□□□□□ -1.32
CCDC40-215ENST00000576033 DEFB113Q30KQ7 82 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 DNM1P34Q6PK57 102 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 GDPGP1Q6ZNW5 385 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 NAA40Q86UY6 237 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 PHC2Q8IXK0 858 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 TIGD4Q8IY51 512 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 MUC15Q8N387 334 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 ZNF611Q8N823 705 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 OR6N2Q8NGY6 317 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 TBC1D15Q8TC07 691 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 TMEM171Q8WVE6 324 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 RPL3LQ92901 407 aaKnown RBP6.8□□□□□ -1.32
CCDC40-215ENST00000576033 SNX18Q96RF0 628 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 TEAD3Q99594 435 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 CACNG6Q9BXT2 260 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 TPK1Q9H3S4 243 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 ADGRL4Q9HBW9 690 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 ERVK13-1Q9NX77 482 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 PLEK2Q9NYT0 353 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 CYB5R1Q9UHQ9 305 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 FBXL3Q9UKT7 428 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 COPS3Q9UNS2 423 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 SF3B6Q9Y3B4 125 aaKnown RBP6.8□□□□□ -1.32
CCDC40-215ENST00000576033 FKBP7Q9Y680 259 aa6.8□□□□□ -1.32
CCDC40-215ENST00000576033 C12orf71A8MTZ7 269 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 SGCEO43556 437 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 GPX5O75715 221 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 GOSR1O95249 250 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 SBK2P0C263 348 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 SLC2A1P11166 492 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 NR2C1P13056 603 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 HOXB1P14653 301 aaPredicted RBP6.79□□□□□ -1.32
CCDC40-215ENST00000576033 MYL12AP19105 171 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 NR4A1P22736 598 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 APLNRP35414 380 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 PTH2RP49190 550 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 ART1P52961 327 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 RPS7P62081 194 aaKnown RBP6.79□□□□□ -1.32
CCDC40-215ENST00000576033 NCS1P62166 190 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 HIST1H3AP68431 136 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 BDH1Q02338 343 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 MED22Q15528 200 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 KCNMB1Q16558 191 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 TSTQ16762 297 aaKnown RBP6.79□□□□□ -1.32
CCDC40-215ENST00000576033 TBC1D28Q2M2D7 210 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 SNAI3Q3KNW1 292 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 NRN1LQ496H8 165 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 SPRNQ5BIV9 151 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 SLC35D3Q5M8T2 416 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 HIST2H3PS2Q5TEC6 136 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 CD200R1LQ6Q8B3 271 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 ZNF322Q6U7Q0 402 aaPredicted RBP6.79□□□□□ -1.32
CCDC40-215ENST00000576033 PLEKHG7Q6ZR37 379 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 HIST2H3AQ71DI3 136 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 DPY19L4Q7Z388 723 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 DCXRQ7Z4W1 244 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 FAM169BQ8N8A8 192 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 WFDC11Q8NEX6 87 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 OR10H5Q8NGA6 315 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 OR4F15Q8NGB8 312 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 OR2T4Q8NH00 348 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 ABHD4Q8TB40 342 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 SORCS2Q96PQ0 1159 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 DHRS9Q9BPW9 319 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 KCNS3Q9BQ31 491 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 USB1Q9BQ65 265 aaKnown RBP6.79□□□□□ -1.32
CCDC40-215ENST00000576033 DCUN1D5Q9BTE7 237 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 NXF2Q9GZY0 626 aaKnown RBP6.79□□□□□ -1.32
CCDC40-215ENST00000576033 CDH20Q9HBT6 801 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 CAB39Q9Y376 341 aaPredicted RBP6.79□□□□□ -1.32
CCDC40-215ENST00000576033 TIMM10BQ9Y5J6 103 aa6.79□□□□□ -1.32
CCDC40-215ENST00000576033 A3GALT2U3KPV4 340 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms