RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 GNG8Q9UK08 70 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 GTF2A1LQ9UNN4 478 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 TPRKBQ9Y3C4 175 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 CRYBG3Q68DQ2 2970 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 FLNBO75369 2602 aaKnown RBP12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 ABCA12Q86UK0 2595 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 CHD3Q12873 2000 aaKnown RBP12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 TMEM269A0A1B0GVZ9 245 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 A0A1W2PPW3 197 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 METTL15A6NJ78 407 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 B9A039 149 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 SLC1A7O00341 560 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 SULT1C4O75897 302 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 RPP14O95059 124 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 TACSTD2P09758 323 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 DNASE1P24855 282 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 KLF3P57682 345 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 PSMA6P60900 246 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 SNRPD2P62316 118 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 TIGD6Q17RP2 521 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 TP53I3Q53FA7 332 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 PAMR1Q6UXH9 720 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 AHSA2Q719I0 299 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 TMEM80Q96HE8 168 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 LURAP1Q96LR2 239 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 SYT3Q9BQG1 590 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 ALG8Q9BVK2 526 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 OR10A2Q9H208 303 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 LIME1Q9H400 295 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 CBLN4Q9NTU7 201 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 PLCXD1Q9NUJ7 323 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 CNOT2Q9NZN8 540 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 MRM2Q9UI43 246 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 GPR160Q9UJ42 338 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 PLEKHA6Q9Y2H5 1048 aa12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 EXOSC1Q9Y3B2 195 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-218ENST00000574964 PRR32B1ATL7 298 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 PTGES3LE9PB15 166 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 J3QRE1 110 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 XRCC2O43543 280 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 DENRO43583 198 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 IGHA1P01876 353 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 RAF1P04049 648 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 SOD3P08294 240 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 DANCRP0C864 163 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 PIPP12273 146 aaPredicted RBP12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 DCTDP32321 178 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 ACTA2P62736 377 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 ACTG2P63267 376 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 ST3GAL4Q11206 333 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 MOGQ16653 247 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 LAIR2Q6ISS4 152 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 COLCA1Q6ZS62 124 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 MRPL21Q7Z2W9 205 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 ZNF786Q8N393 782 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 OR52H1Q8NGJ2 320 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 KLF14Q8TD94 323 aaPredicted RBP12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 PIGTQ969N2 578 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 CMBLQ96DG6 245 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 MARS2Q96GW9 593 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 MRPL37Q9BZE1 423 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 DYNLRB1Q9NP97 96 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 ERVK13-1Q9NX77 482 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 PSORS1C1Q9UIG5 152 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 ST6GALNAC2Q9UJ37 374 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 PMF1-BGLAPU3KQ54 211 aa12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 ANKRD17O75179 2603 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-218ENST00000574964 LOC110117498-PIK3R3F6TDL0 507 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 H3BSA7 217 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 J3QLW9 94 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 TIMM8AO60220 97 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 CLPTM1O96005 669 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 CCDC159P0C7I6 412 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 ZNF250P15622 560 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 ZNF19P17023 458 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 GALEQ14376 348 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 EFNB3Q15768 340 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 NKPD1Q17RQ9 610 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 GFOD2Q3B7J2 385 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 SNAI3Q3KNW1 292 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 CDONQ4KMG0 1287 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 LIPNQ5VXI9 398 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 PGAP1Q75T13 922 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 KCTD20Q7Z5Y7 419 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 LRP11Q86VZ4 500 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 COMMD2Q86X83 199 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 MYDGFQ969H8 173 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 RHNO1Q9BSD3 238 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 TRAF4Q9BUZ4 470 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 POFUT1Q9H488 388 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 CXorf56Q9H5V9 222 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 TAAR3PQ9P1P4 343 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 BLOC1S6Q9UL45 172 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 DIMT1Q9UNQ2 313 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 SNX5Q9Y5X3 404 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 R4GMQ9 66 aa12.46□□□□□ -0.41
NPLOC4-218ENST00000574964 HRNRQ86YZ3 2850 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-218ENST00000574964 GGT3PA6NGU5 568 aa12.45□□□□□ -0.42
NPLOC4-218ENST00000574964 ACOD1A6NK06 481 aa12.45□□□□□ -0.42
NPLOC4-218ENST00000574964 M0R233 179 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms