RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 LRCH1Q9Y2L9 728 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 RTTNQ86VV8 2226 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 RAI1Q7Z5J4 1906 aaPredicted RBP14.71□□□□□ -0.05
NUP88-210ENST00000574867 BAHCC1Q9P281 2608 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 THBS4P35443 961 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 GABARAPL2P60520 117 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 TP53I3Q53FA7 332 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 LIPNQ5VXI9 398 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 VHLLQ6RSH7 139 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 TMPRSS11AQ6ZMR5 421 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 ZNF611Q8N823 705 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 C4orf36Q96KX1 117 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 PLEKHF2Q9H8W4 249 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 ACOXLQ9NUZ1 547 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 PAK1IP1Q9NWT1 392 aaPredicted RBP14.71□□□□□ -0.05
NUP88-210ENST00000574867 FAM206AQ9NX38 181 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 CAB39Q9Y376 341 aaPredicted RBP14.71□□□□□ -0.05
NUP88-210ENST00000574867 CMAHPQ9Y471 501 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 R4GMQ9 66 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 HECTD1Q9ULT8 2610 aa14.71□□□□□ -0.05
NUP88-210ENST00000574867 TMEM269A0A1B0GVZ9 245 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 MAGEB4O15481 346 aaPredicted RBP14.7□□□□□ -0.06
NUP88-210ENST00000574867 APOBEC3AP31941 199 aaPredicted RBP14.7□□□□□ -0.06
NUP88-210ENST00000574867 ETV1P50549 477 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 MALLQ13021 153 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 MRPL28Q13084 256 aaKnown RBP14.7□□□□□ -0.06
NUP88-210ENST00000574867 RNLSQ5VYX0 342 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 PRSS45Q7RTY3 260 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 KLHL36Q8N4N3 616 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 UBTD1Q9HAC8 227 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 TMEM129A0AVI4 362 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 XRCC2O43543 280 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 RGS10O43665 173 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 SRSF10O75494 262 aaKnown RBP14.7□□□□□ -0.06
NUP88-210ENST00000574867 ADRA2AP08913 450 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 SLC2A1P11166 492 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 C21orf33P30042 268 aaPredicted RBP14.7□□□□□ -0.06
NUP88-210ENST00000574867 OR12D2P58182 307 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 ERVS71-1P61550 626 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 MVKQ03426 396 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 C20orf204Q6ZNR8 217 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 NAA40Q86UY6 237 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 OR52N1Q8NH53 320 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 SLC25A40Q8TBP6 338 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 CDCA4Q9BXL8 241 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 OR10A2Q9H208 303 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 OPA3Q9H6K4 179 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 STARD10Q9Y365 291 aa14.7□□□□□ -0.06
NUP88-210ENST00000574867 LOC110117498-PIK3R3F6TDL0 507 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 J3QLW9 94 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 MYL12BO14950 172 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 MT-ND5P03915 603 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 ZNF19P17023 458 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 FABP6P51161 128 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 ADIPOQQ15848 244 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 SNAI3Q3KNW1 292 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 ZNF718Q3SXZ3 478 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 MBNL2Q5VZF2 373 aaKnown RBP14.69□□□□□ -0.06
NUP88-210ENST00000574867 FAM57BQ71RH2 274 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 FBXL14Q8N1E6 418 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 MRPL24Q96A35 216 aaKnown RBP14.69□□□□□ -0.06
NUP88-210ENST00000574867 MARS2Q96GW9 593 aaKnown RBP14.69□□□□□ -0.06
NUP88-210ENST00000574867 PGAM5Q96HS1 289 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 SIGLEC11Q96RL6 698 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 OR2J1Q9GZK6 312 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 RGCCQ9H4X1 137 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 NUFIP1Q9UHK0 495 aaKnown RBP14.69□□□□□ -0.06
NUP88-210ENST00000574867 ZNF391Q9UJN7 358 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 ERGIC3Q9Y282 383 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 SNX5Q9Y5X3 404 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 HRNRQ86YZ3 2850 aaPredicted RBP14.69□□□□□ -0.06
NUP88-210ENST00000574867 TBX1O43435 398 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 RPP14O95059 124 aaKnown RBP14.69□□□□□ -0.06
NUP88-210ENST00000574867 OR4A8P0C604 315 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 ZNF250P15622 560 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 EEF1B2P24534 225 aaKnown RBP14.69□□□□□ -0.06
NUP88-210ENST00000574867 GCH1P30793 250 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 TTKP33981 857 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 SERPINF1P36955 418 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 SELENOVP59797 346 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 SPATA46Q5T0L3 261 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 FBXW12Q6X9E4 464 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 PRSS48Q7RTY5 328 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 KLF14Q8TD94 323 aaPredicted RBP14.69□□□□□ -0.06
NUP88-210ENST00000574867 PELI1Q96FA3 418 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 BRD7Q9NPI1 651 aa14.69□□□□□ -0.06
NUP88-210ENST00000574867 MRPS14O60783 128 aaKnown RBP14.68□□□□□ -0.06
NUP88-210ENST00000574867 CFL1P23528 166 aaKnown RBP14.68□□□□□ -0.06
NUP88-210ENST00000574867 KLF3P57682 345 aaPredicted RBP14.68□□□□□ -0.06
NUP88-210ENST00000574867 MFGE8Q08431 387 aaPredicted RBP14.68□□□□□ -0.06
NUP88-210ENST00000574867 EFNB3Q15768 340 aa14.68□□□□□ -0.06
NUP88-210ENST00000574867 BCL2L15Q5TBC7 163 aa14.68□□□□□ -0.06
NUP88-210ENST00000574867 MUC15Q8N387 334 aa14.68□□□□□ -0.06
NUP88-210ENST00000574867 SYNPRQ8TBG9 265 aa14.68□□□□□ -0.06
NUP88-210ENST00000574867 RORBQ92753 470 aa14.68□□□□□ -0.06
NUP88-210ENST00000574867 PBOV1Q9GZY1 135 aa14.68□□□□□ -0.06
NUP88-210ENST00000574867 PLK3Q9H4B4 646 aa14.68□□□□□ -0.06
NUP88-210ENST00000574867 ISG20L2Q9H9L3 353 aaKnown RBP14.68□□□□□ -0.06
NUP88-210ENST00000574867 PTTG3PQ9NZH4 202 aa14.68□□□□□ -0.06
NUP88-210ENST00000574867 ERVK-18Q9QC07 812 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 961.6 ms