RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 CENPMQ9NSP4 180 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 DOK5Q9P104 306 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 BRWD1Q9NSI6 2320 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 SCN3AQ9NY46 2000 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 A0A1W2PP55 124 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 SLC17A2O00624 439 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 VEGFDO43915 354 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 IFNA21P01568 189 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 CD37P11049 281 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 CD79AP11912 226 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 AGAP20933 346 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 CMPK1P30085 196 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 RAB32Q13637 225 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 CST6Q15828 149 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 ALG11Q2TAA5 492 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 OR13C3Q8NGS6 347 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 FAM213BQ8TBF2 198 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 THRSPQ92748 146 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 MS4A6EQ96DS6 147 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 MFRPQ9BY79 579 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 C8orf33Q9H7E9 229 aaPredicted RBP8.62□□□□□ -1.03
CCDC40-212ENST00000574799 GDF2Q9UK05 429 aaPredicted RBP8.62□□□□□ -1.03
CCDC40-212ENST00000574799 CYP8B1Q9UNU6 501 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 ADAM10O14672 748 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 CYB5BO43169 146 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 SERPINA2P20848 420 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 IGFALSP35858 605 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 CX3CR1P49238 355 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 NAAAQ02083 359 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 HIST2H3PS2Q5TEC6 136 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 DMBX1Q8NFW5 382 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 OR4K15Q8NH41 348 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 MRPL38Q96DV4 380 aaKnown RBP8.61□□□□□ -1.03
CCDC40-212ENST00000574799 OR2M4Q96R27 311 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 GABRG3Q99928 467 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 FAM86C1Q9NVL1 165 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 PARPBPQ9NWS1 579 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 TAS2R4Q9NYW5 299 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 CA14Q9ULX7 337 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 PLRG1O43660 514 aaKnown RBP8.61□□□□□ -1.03
CCDC40-212ENST00000574799 B3GALT2O43825 422 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 ZIC2O95409 532 aaPredicted RBP8.61□□□□□ -1.03
CCDC40-212ENST00000574799 CSTAP01040 98 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 THBS1P07996 1170 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 S1PR1P21453 382 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 SLC2A5P22732 501 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 TUBG1P23258 451 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 CDX1P47902 265 aaPredicted RBP8.61□□□□□ -1.03
CCDC40-212ENST00000574799 PKIAP61925 76 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 GPR18Q14330 331 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 TOMM34Q15785 309 aaPredicted RBP8.61□□□□□ -1.03
CCDC40-212ENST00000574799 MEP1BQ16820 701 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 ARHGAP11BQ3KRB8 267 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 ALG10Q5BKT4 473 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 SLC16A9Q7RTY1 509 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 ADGRE4PQ86SQ3 457 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 TMEFF1Q8IYR6 380 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 OR51F2Q8NH61 342 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 FLVCR1-AS1Q8TAF5 88 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 NRSN2Q9GZP1 204 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 ELL3Q9HB65 397 aaPredicted RBP8.61□□□□□ -1.03
CCDC40-212ENST00000574799 OR5AC2Q9NZP5 309 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 MRM2Q9UI43 246 aaKnown RBP8.61□□□□□ -1.03
CCDC40-212ENST00000574799 SEC14L6B5MCN3 397 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 TMEM127O75204 238 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 C5AR1P21730 350 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 FCGR2CP31995 323 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 PCP4P48539 62 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 SSBP1Q04837 148 aaKnown RBP8.61□□□□□ -1.03
CCDC40-212ENST00000574799 ARHGAP19Q14CB8 494 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 IAH1Q2TAA2 248 aaPredicted RBP8.61□□□□□ -1.03
CCDC40-212ENST00000574799 DPY19L2P2Q6ZN68 376 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 RD3Q7Z3Z2 195 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 SLC25A42Q86VD7 318 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 DMRTC2Q8IXT2 367 aaPredicted RBP8.61□□□□□ -1.03
CCDC40-212ENST00000574799 GPER1Q99527 375 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 ANKRD10Q9NXR5 420 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 TMEM131Q92545 1883 aa8.61□□□□□ -1.03
CCDC40-212ENST00000574799 CACNA1IQ9P0X4 2223 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 A0A1B0GTI1 187 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 DNAJB6O75190 326 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 DUS4LO95620 317 aaKnown RBP8.6□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF888P0CJ79 500 aaPredicted RBP8.6□□□□□ -1.03
CCDC40-212ENST00000574799 RNH1P13489 461 aaKnown RBP8.6□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF10P21506 573 aaPredicted RBP8.6□□□□□ -1.03
CCDC40-212ENST00000574799 ZBTB25P24278 435 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 HTR5AP47898 357 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 RAB28P51157 221 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 SLC35D3Q5M8T2 416 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 DRAM2Q6UX65 266 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 COX15Q7KZN9 410 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 P4HA3Q7Z4N8 544 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 CDRT4Q8N9R6 151 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 ZNRF4Q8WWF5 429 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 RRNAD1Q96FB5 475 aaKnown RBP8.6□□□□□ -1.03
CCDC40-212ENST00000574799 TGM7Q96PF1 710 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 SCGB3A2Q96PL1 93 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 INSM2Q96T92 566 aaPredicted RBP8.6□□□□□ -1.03
CCDC40-212ENST00000574799 OR11A1Q9GZK7 315 aa8.6□□□□□ -1.03
CCDC40-212ENST00000574799 RNF122Q9H9V4 155 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms