RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 TREM2Q9NZC2 230 aa23.54■■□□□ 1.36
SCARF1-207ENST00000573867 ZDHHC8Q9ULC8 765 aa23.54■■□□□ 1.36
SCARF1-207ENST00000573867 M0R129 80 aa23.53■■□□□ 1.36
SCARF1-207ENST00000573867 GZMKP49863 264 aa23.53■■□□□ 1.36
SCARF1-207ENST00000573867 CHN2P52757 468 aa23.53■■□□□ 1.36
SCARF1-207ENST00000573867 TMEM33P57088 247 aa23.53■■□□□ 1.36
SCARF1-207ENST00000573867 ESRRGP62508 458 aa23.53■■□□□ 1.36
SCARF1-207ENST00000573867 PPP2R2BQ00005 443 aa23.53■■□□□ 1.36
SCARF1-207ENST00000573867 EIF2B1Q14232 305 aaKnown RBP23.53■■□□□ 1.36
SCARF1-207ENST00000573867 GK2Q14410 553 aaPredicted RBP23.53■■□□□ 1.36
SCARF1-207ENST00000573867 KLHL12Q53G59 568 aa23.53■■□□□ 1.36
SCARF1-207ENST00000573867 CXXC5Q7LFL8 322 aaKnown RBP23.53■■□□□ 1.36
SCARF1-207ENST00000573867 SPTSSAQ969W0 71 aa23.53■■□□□ 1.36
SCARF1-207ENST00000573867 CENPNQ96H22 339 aaPredicted RBP23.53■■□□□ 1.36
SCARF1-207ENST00000573867 PKP2Q99959 881 aa23.53■■□□□ 1.36
SCARF1-207ENST00000573867 COPS4Q9BT78 406 aa23.53■■□□□ 1.36
SCARF1-207ENST00000573867 ABHD6Q9BV23 337 aa23.53■■□□□ 1.36
SCARF1-207ENST00000573867 NARFLQ9H6Q4 476 aa23.53■■□□□ 1.36
SCARF1-207ENST00000573867 OAZ3Q9UMX2 235 aa23.53■■□□□ 1.36
SCARF1-207ENST00000573867 PPIHO43447 177 aaKnown RBP23.52■■□□□ 1.36
SCARF1-207ENST00000573867 PRKYO43930 277 aa23.52■■□□□ 1.36
SCARF1-207ENST00000573867 PRKXP51817 358 aa23.52■■□□□ 1.36
SCARF1-207ENST00000573867 SNAPC1Q16533 368 aa23.52■■□□□ 1.36
SCARF1-207ENST00000573867 ZMAT1Q5H9K5 638 aa23.52■■□□□ 1.36
SCARF1-207ENST00000573867 OR2Z1Q8NG97 314 aa23.52■■□□□ 1.36
SCARF1-207ENST00000573867 CLDND2Q8NHS1 167 aa23.52■■□□□ 1.36
SCARF1-207ENST00000573867 ELMOD3Q96FG2 381 aa23.52■■□□□ 1.36
SCARF1-207ENST00000573867 PLEKHA8Q96JA3 519 aa23.52■■□□□ 1.36
SCARF1-207ENST00000573867 DIRC2Q96SL1 478 aa23.52■■□□□ 1.36
SCARF1-207ENST00000573867 CIB1Q99828 191 aa23.52■■□□□ 1.36
SCARF1-207ENST00000573867 DCAF16Q9NXF7 216 aa23.52■■□□□ 1.36
SCARF1-207ENST00000573867 SAC3D1A6NKF1 404 aa23.51■■□□□ 1.35
SCARF1-207ENST00000573867 ZAR1LA6NP61 321 aa23.51■■□□□ 1.35
SCARF1-207ENST00000573867 A8MV72 311 aaPredicted RBP23.51■■□□□ 1.35
SCARF1-207ENST00000573867 ZNF878C9JN71 531 aa23.51■■□□□ 1.35
SCARF1-207ENST00000573867 PRODHO43272 600 aa23.51■■□□□ 1.35
SCARF1-207ENST00000573867 SLC2A1P11166 492 aa23.51■■□□□ 1.35
SCARF1-207ENST00000573867 TNFAIP6P98066 277 aaPredicted RBP23.51■■□□□ 1.35
SCARF1-207ENST00000573867 AVPI1Q5T686 147 aa23.51■■□□□ 1.35
SCARF1-207ENST00000573867 KCNJ15Q99712 375 aa23.51■■□□□ 1.35
SCARF1-207ENST00000573867 KLHDC2Q9Y2U9 406 aa23.51■■□□□ 1.35
SCARF1-207ENST00000573867 CCDC182A6NF36 153 aa23.5■■□□□ 1.35
SCARF1-207ENST00000573867 IQCF6A8MYZ5 107 aa23.5■■□□□ 1.35
SCARF1-207ENST00000573867 POLR2IP36954 125 aaKnown RBP23.5■■□□□ 1.35
SCARF1-207ENST00000573867 NAA10P41227 235 aaPredicted RBP23.5■■□□□ 1.35
SCARF1-207ENST00000573867 SLC6A9P48067 706 aa23.5■■□□□ 1.35
SCARF1-207ENST00000573867 APOFQ13790 326 aa23.5■■□□□ 1.35
SCARF1-207ENST00000573867 SLX4IPQ5VYV7 408 aa23.5■■□□□ 1.35
SCARF1-207ENST00000573867 DRAM2Q6UX65 266 aa23.5■■□□□ 1.35
SCARF1-207ENST00000573867 BCDIN3DQ7Z5W3 292 aaKnown RBP23.5■■□□□ 1.35
SCARF1-207ENST00000573867 BHLHE23Q8NDY6 225 aa23.5■■□□□ 1.35
SCARF1-207ENST00000573867 OR8G5Q8NG78 346 aa23.5■■□□□ 1.35
SCARF1-207ENST00000573867 OR2AE1Q8NHA4 323 aa23.5■■□□□ 1.35
SCARF1-207ENST00000573867 RNF133Q8WVZ7 376 aa23.5■■□□□ 1.35
SCARF1-207ENST00000573867 SVEP1Q4LDE5 3571 aa23.5■■□□□ 1.35
SCARF1-207ENST00000573867 H0YL77 283 aa23.49■■□□□ 1.35
SCARF1-207ENST00000573867 MLNRO43193 412 aa23.49■■□□□ 1.35
SCARF1-207ENST00000573867 CRLF1O75462 422 aa23.49■■□□□ 1.35
SCARF1-207ENST00000573867 IGFBP5P24593 272 aa23.49■■□□□ 1.35
SCARF1-207ENST00000573867 EFNB1P98172 346 aa23.49■■□□□ 1.35
SCARF1-207ENST00000573867 MVKQ03426 396 aa23.49■■□□□ 1.35
SCARF1-207ENST00000573867 ZNF92Q03936 586 aa23.49■■□□□ 1.35
SCARF1-207ENST00000573867 SLC35D3Q5M8T2 416 aa23.49■■□□□ 1.35
SCARF1-207ENST00000573867 GLYATL3Q5SZD4 288 aa23.49■■□□□ 1.35
SCARF1-207ENST00000573867 C12orf73Q69YU5 71 aa23.49■■□□□ 1.35
SCARF1-207ENST00000573867 OR10AD1Q8NGE0 317 aa23.49■■□□□ 1.35
SCARF1-207ENST00000573867 ITLN1Q8WWA0 313 aa23.49■■□□□ 1.35
SCARF1-207ENST00000573867 CCL17Q92583 94 aa23.49■■□□□ 1.35
SCARF1-207ENST00000573867 EGLN1Q9GZT9 426 aa23.49■■□□□ 1.35
SCARF1-207ENST00000573867 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.49■■□□□ 1.35
SCARF1-207ENST00000573867 OPRL1P41146 370 aa23.48■■□□□ 1.35
SCARF1-207ENST00000573867 TAF13Q15543 124 aa23.48■■□□□ 1.35
SCARF1-207ENST00000573867 HFEQ30201 348 aa23.48■■□□□ 1.35
SCARF1-207ENST00000573867 SHFQ7M4L6 423 aa23.48■■□□□ 1.35
SCARF1-207ENST00000573867 OTOSQ8NHW6 89 aa23.48■■□□□ 1.35
SCARF1-207ENST00000573867 HPS1Q92902 700 aa23.48■■□□□ 1.35
SCARF1-207ENST00000573867 C1orf159Q96HA4 380 aa23.48■■□□□ 1.35
SCARF1-207ENST00000573867 ZNF582Q96NG8 517 aaPredicted RBP23.48■■□□□ 1.35
SCARF1-207ENST00000573867 SLC30A2Q9BRI3 323 aa23.48■■□□□ 1.35
SCARF1-207ENST00000573867 OSBPL10Q9BXB5 764 aa23.48■■□□□ 1.35
SCARF1-207ENST00000573867 TEX12Q9BXU0 123 aa23.48■■□□□ 1.35
SCARF1-207ENST00000573867 WIPI2Q9Y4P8 454 aa23.48■■□□□ 1.35
SCARF1-207ENST00000573867 TANC2Q9HCD6 1990 aa23.48■■□□□ 1.35
SCARF1-207ENST00000573867 LOC100289279A0A1B0GTE1 492 aa23.47■■□□□ 1.35
SCARF1-207ENST00000573867 A0A1B0GWJ7 208 aa23.47■■□□□ 1.35
SCARF1-207ENST00000573867 HCCSP53701 268 aa23.47■■□□□ 1.35
SCARF1-207ENST00000573867 LMO4P61968 165 aa23.47■■□□□ 1.35
SCARF1-207ENST00000573867 RPS7P62081 194 aaKnown RBP23.47■■□□□ 1.35
SCARF1-207ENST00000573867 MALLQ13021 153 aa23.47■■□□□ 1.35
SCARF1-207ENST00000573867 PGAP1Q75T13 922 aa23.47■■□□□ 1.35
SCARF1-207ENST00000573867 PRSS45Q7RTY3 260 aa23.47■■□□□ 1.35
SCARF1-207ENST00000573867 OR2V2Q96R30 315 aa23.47■■□□□ 1.35
SCARF1-207ENST00000573867 MALRD1Q5VYJ5 2156 aa23.47■■□□□ 1.35
SCARF1-207ENST00000573867 CLDN25C9JDP6 229 aa23.46■■□□□ 1.35
SCARF1-207ENST00000573867 CX3CR1P49238 355 aa23.46■■□□□ 1.35
SCARF1-207ENST00000573867 GRB2P62993 217 aaKnown RBP23.46■■□□□ 1.35
SCARF1-207ENST00000573867 ZNF283Q8N7M2 679 aa23.46■■□□□ 1.35
SCARF1-207ENST00000573867 TCEANCQ8N8B7 351 aa23.46■■□□□ 1.35
SCARF1-207ENST00000573867 TEAD3Q99594 435 aa23.46■■□□□ 1.35
SCARF1-207ENST00000573867 IL19Q9UHD0 177 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms