RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 VCX3BQ9H321 246 aa14.77□□□□□ -0.05
LITAF-212ENST00000573332 TAAR3PQ9P1P4 343 aa14.77□□□□□ -0.05
LITAF-212ENST00000573332 CSMD1Q96PZ7 3565 aa14.77□□□□□ -0.05
LITAF-212ENST00000573332 A0A1W2PPW3 197 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 J3QRE1 110 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 NDUFS7O75251 213 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 F12P00748 615 aaPredicted RBP14.76□□□□□ -0.05
LITAF-212ENST00000573332 IGHV4-39P01824 125 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 ADRA2AP08913 450 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 ATP6V1E1P36543 226 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 SLC6A9P48067 706 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 CX3CR1P49238 355 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 MMP15P51511 669 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 EFNA4P52798 201 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 CXCR4P61073 352 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 ISL1P61371 349 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 EGR3Q06889 387 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 TMEM255AQ5JRV8 349 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 ZNF322Q6U7Q0 402 aaPredicted RBP14.76□□□□□ -0.05
LITAF-212ENST00000573332 LRRN1Q6UXK5 716 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 SPNS3Q6ZMD2 512 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 NEU4Q8WWR8 484 aaPredicted RBP14.76□□□□□ -0.05
LITAF-212ENST00000573332 TFAP2CQ92754 450 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 CMBLQ96DG6 245 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 SORCS2Q96PQ0 1159 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 RAB1BQ9H0U4 201 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 DYNLRB1Q9NP97 96 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 CYSLTR2Q9NS75 346 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 MRPS18AQ9NVS2 196 aaKnown RBP14.76□□□□□ -0.05
LITAF-212ENST00000573332 AASSQ9UDR5 926 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 PURGQ9UJV8 347 aaKnown RBP14.76□□□□□ -0.05
LITAF-212ENST00000573332 EXOGQ9Y2C4 368 aaKnown RBP14.76□□□□□ -0.05
LITAF-212ENST00000573332 RRP15Q9Y3B9 282 aaKnown RBP14.76□□□□□ -0.05
LITAF-212ENST00000573332 LRP12Q9Y561 859 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 PCDHGB1Q9Y5G3 927 aa14.76□□□□□ -0.05
LITAF-212ENST00000573332 ACOD1A6NK06 481 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 PRR32B1ATL7 298 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 WBP4O75554 376 aaKnown RBP14.75□□□□□ -0.05
LITAF-212ENST00000573332 CLIC3O95833 236 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 ALDH3B1P43353 468 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 IL5RAQ01344 420 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 MALLQ13021 153 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 NKPD1Q17RQ9 610 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 SNAI3Q3KNW1 292 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 USP51Q70EK9 711 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 OR52H1Q8NGJ2 320 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 SNX33Q8WV41 574 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 RNFT2Q96EX2 444 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 VRK1Q99986 396 aaPredicted RBP14.75□□□□□ -0.05
LITAF-212ENST00000573332 NKIRAS2Q9NYR9 191 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 PTTG3PQ9NZH4 202 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 TEX15Q9BXT5 2789 aa14.75□□□□□ -0.05
LITAF-212ENST00000573332 C17orf100A8MU93 164 aa14.74□□□□□ -0.05
LITAF-212ENST00000573332 XRCC2O43543 280 aa14.74□□□□□ -0.05
LITAF-212ENST00000573332 MT-ND5P03915 603 aa14.74□□□□□ -0.05
LITAF-212ENST00000573332 ERCC1P07992 297 aaPredicted RBP14.74□□□□□ -0.05
LITAF-212ENST00000573332 ADH4P08319 380 aa14.74□□□□□ -0.05
LITAF-212ENST00000573332 DBTP11182 482 aaKnown RBP14.74□□□□□ -0.05
LITAF-212ENST00000573332 SELEP16581 610 aa14.74□□□□□ -0.05
LITAF-212ENST00000573332 ZNF121P58317 390 aaPredicted RBP14.74□□□□□ -0.05
LITAF-212ENST00000573332 PSMA6P60900 246 aaKnown RBP14.74□□□□□ -0.05
LITAF-212ENST00000573332 ACTC1P68032 377 aa14.74□□□□□ -0.05
LITAF-212ENST00000573332 ACTA1P68133 377 aa14.74□□□□□ -0.05
LITAF-212ENST00000573332 ZNF91Q05481 1191 aa14.74□□□□□ -0.05
LITAF-212ENST00000573332 GK2Q14410 553 aaPredicted RBP14.74□□□□□ -0.05
LITAF-212ENST00000573332 ZNF684Q5T5D7 378 aa14.74□□□□□ -0.05
LITAF-212ENST00000573332 DNM1P46Q6ZS02 220 aa14.74□□□□□ -0.05
LITAF-212ENST00000573332 RFLNBQ8N5W9 214 aa14.74□□□□□ -0.05
LITAF-212ENST00000573332 SPSB4Q96A44 273 aa14.74□□□□□ -0.05
LITAF-212ENST00000573332 REPIN1Q9BWE0 567 aaKnown RBP14.74□□□□□ -0.05
LITAF-212ENST00000573332 OPA3Q9H6K4 179 aa14.74□□□□□ -0.05
LITAF-212ENST00000573332 RPL36Q9Y3U8 105 aaKnown RBP14.74□□□□□ -0.05
LITAF-212ENST00000573332 A0A1W2PQL4 384 aaPredicted RBP14.73□□□□□ -0.05
LITAF-212ENST00000573332 PLSCR5A0PG75 271 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 IQCF6A8MYZ5 107 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 TIMM8AO60220 97 aaPredicted RBP14.73□□□□□ -0.05
LITAF-212ENST00000573332 SULT1C4O75897 302 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 APOL3O95236 402 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 SLC2A1P11166 492 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 ANOS1P23352 680 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 MMP16P51512 607 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 RIDAP52758 137 aaKnown RBP14.73□□□□□ -0.05
LITAF-212ENST00000573332 AQP4P55087 323 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 RAB40BQ12829 278 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 HLXQ14774 488 aaPredicted RBP14.73□□□□□ -0.05
LITAF-212ENST00000573332 PCGF3Q3KNV8 242 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 ALKBH6Q3KRA9 238 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 ZMAT1Q5H9K5 638 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 Q5PR19 223 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 PGAP1Q75T13 922 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 C8orf59Q8N0T1 100 aaPredicted RBP14.73□□□□□ -0.05
LITAF-212ENST00000573332 ZCCHC24Q8N2G6 241 aaKnown RBP14.73□□□□□ -0.05
LITAF-212ENST00000573332 FBLIM1Q8WUP2 373 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 LGALS12Q96DT0 336 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 MRM2Q9UI43 246 aaKnown RBP14.73□□□□□ -0.05
LITAF-212ENST00000573332 IKZF2Q9UKS7 526 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 CCDC168Q8NDH2 2452 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 USF3Q68DE3 2245 aa14.73□□□□□ -0.05
LITAF-212ENST00000573332 C5orf63A6NC05 138 aa14.72□□□□□ -0.05
LITAF-212ENST00000573332 ANXA2P07355 339 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms