RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 PPP1R8Q12972 351 aaKnown RBP15.15■□□□□ 0.02
CHD3-214ENST00000572579 SCGB2A2Q13296 93 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 SLC27A4Q6P1M0 643 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 PGM2L1Q6PCE3 622 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 CPLX4Q7Z7G2 160 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 DEFB107AQ8IZN7 70 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 BPIFB2Q8N4F0 458 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 GCDHQ92947 438 aaPredicted RBP15.15■□□□□ 0.02
CHD3-214ENST00000572579 SLCO4A1Q96BD0 722 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 ATF6BQ99941 703 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 TMEM246Q9BRR3 403 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 TMEM100Q9NV29 134 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 VNN3Q9NY84 501 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 PPIAL4AQ9Y536 164 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 AUP1Q9Y679 476 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 TCRBV5S2A0A599 114 aa15.14■□□□□ 0.01
CHD3-214ENST00000572579 TVP23AA6NH52 213 aa15.14■□□□□ 0.01
CHD3-214ENST00000572579 RAD23AP54725 363 aa15.14■□□□□ 0.01
CHD3-214ENST00000572579 MPPED2Q15777 294 aa15.14■□□□□ 0.01
CHD3-214ENST00000572579 SNAI3Q3KNW1 292 aa15.14■□□□□ 0.01
CHD3-214ENST00000572579 LYPD2Q6UXB3 125 aa15.14■□□□□ 0.01
CHD3-214ENST00000572579 CYP2R1Q6VVX0 501 aa15.14■□□□□ 0.01
CHD3-214ENST00000572579 C19orf18Q8NEA5 215 aa15.14■□□□□ 0.01
CHD3-214ENST00000572579 OR51L1Q8NGJ5 315 aa15.14■□□□□ 0.01
CHD3-214ENST00000572579 TAF15Q92804 592 aaKnown RBP eCLIP15.14■□□□□ 0.01
CHD3-214ENST00000572579 POP5Q969H6 163 aaKnown RBP15.14■□□□□ 0.01
CHD3-214ENST00000572579 MCUR1Q96AQ8 359 aa15.14■□□□□ 0.01
CHD3-214ENST00000572579 DUX5Q96PT3 197 aa15.14■□□□□ 0.01
CHD3-214ENST00000572579 RBM4Q9BWF3 364 aaKnown RBP15.14■□□□□ 0.01
CHD3-214ENST00000572579 NUP50Q9UKX7 468 aa15.14■□□□□ 0.01
CHD3-214ENST00000572579 IGHV3OR16-10A0A075B7F0 116 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 LCATP04180 440 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 IGHV4-38-2P0DP08 117 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 NOS3P29474 1203 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 MAGEA2P43356 314 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 GATA4P43694 442 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 ZNF92Q03936 586 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 ZNF181Q2M3W8 571 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 ZNF841Q6ZN19 808 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 DOK3Q7L591 496 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 KLBQ86Z14 1044 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 IL20Q9NYY1 176 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 TMCC3Q9ULS5 477 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 ARL2BPQ9Y2Y0 163 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 CDH10Q9Y6N8 788 aa15.13■□□□□ 0.01
CHD3-214ENST00000572579 FSTL3O95633 263 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 HLA-DQA2P01906 255 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 OTX1P32242 354 aaPredicted RBP15.12■□□□□ 0.01
CHD3-214ENST00000572579 IFNGR2P38484 337 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 SRP9P49458 86 aaKnown RBP15.12■□□□□ 0.01
CHD3-214ENST00000572579 MS4A2Q01362 244 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 ECH1Q13011 328 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 ZNF404Q494X3 552 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 SLC36A3Q495N2 470 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 AWAT1Q58HT5 328 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 PRAMEF6Q5VXH4 476 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 ZNF511Q8NB15 262 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 SLC37A3Q8NCC5 494 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 OR4Q3Q8NH05 313 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 JMJD8Q96S16 334 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 CDADC1Q9BWV3 514 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 NMNAT2Q9BZQ4 307 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 DDX28Q9NUL7 540 aaKnown RBP15.12■□□□□ 0.01
CHD3-214ENST00000572579 MGAM2Q2M2H8 2515 aa15.12■□□□□ 0.01
CHD3-214ENST00000572579 TNFRSF11BO00300 401 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 TNFRSF13BO14836 293 aaPredicted RBP15.11■□□□□ 0.01
CHD3-214ENST00000572579 KRT36O76013 467 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 CLUP10909 449 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 FPR2P25090 351 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 CD200P41217 278 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 GNGT1P63211 74 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 PCK2Q16822 640 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 ESCO2Q56NI9 601 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 MUC20Q8N307 709 aaPredicted RBP15.11■□□□□ 0.01
CHD3-214ENST00000572579 FITM2Q8N6M3 262 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 OR9Q1Q8NGQ5 310 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 OR2AJ1Q8NGZ0 328 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 OR2AE1Q8NHA4 323 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 Q8TCH9 128 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 SSBP3Q9BWW4 388 aaPredicted RBP15.11■□□□□ 0.01
CHD3-214ENST00000572579 HCAR1Q9BXC0 346 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 TRIM15Q9C019 465 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 NSRP1Q9H0G5 558 aaKnown RBP15.11■□□□□ 0.01
CHD3-214ENST00000572579 UFSP2Q9NUQ7 469 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 LRCH1Q9Y2L9 728 aa15.11■□□□□ 0.01
CHD3-214ENST00000572579 CMYA5Q8N3K9 4069 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 IGHV2-70DA0A0C4DH43 119 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 CD300LBA8K4G0 201 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 IFNL4K9M1U5 179 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 M0R135 149 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 FAM20BO75063 409 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 FCN3O75636 299 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 GYPBP06028 91 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 RPS2P15880 293 aaKnown RBP15.1■□□□□ 0.01
CHD3-214ENST00000572579 CA6P23280 308 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 GLYATL3Q5SZD4 288 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 C16orf89Q6UX73 402 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 RASSF6Q6ZTQ3 369 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 PGAP1Q75T13 922 aa15.1■□□□□ 0.01
CHD3-214ENST00000572579 LNX2Q8N448 690 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms