RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 ACHEP22303 614 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 USF1P22415 310 aaPredicted RBP7.35□□□□□ -1.23
SMG6-210ENST00000572205 IGFBP5P24593 272 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 ENTPD1P49961 510 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 LMO4P61968 165 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 CCL8P80075 99 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 KPNB1Q14974 876 aaKnown RBP7.35□□□□□ -1.23
SMG6-210ENST00000572205 C1orf146Q5VVC0 180 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 SLX4IPQ5VYV7 408 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 DCXRQ7Z4W1 244 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 AMIGO2Q86SJ2 522 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 C1orf174Q8IYL3 243 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 PROKR2Q8NFJ6 384 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 OR5K1Q8NHB7 308 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 TEX47Q8TBZ9 253 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 UBASH3BQ8TF42 649 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 RNF133Q8WVZ7 376 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 PYDC1Q8WXC3 89 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 HAVCR1Q96D42 359 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 MSI2Q96DH6 328 aaKnown RBP7.35□□□□□ -1.23
SMG6-210ENST00000572205 CIB1Q99828 191 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 PIMREGQ9BSJ6 248 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 WNT10AQ9GZT5 417 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 RAB1BQ9H0U4 201 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 KCNN2Q9H2S1 579 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 MS4A5Q9H3V2 200 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 CHODLQ9H9P2 273 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 MSL2Q9HCI7 577 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 SLCO1C1Q9NYB5 712 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 ZNF319Q9P2F9 582 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 OAZ3Q9UMX2 235 aa7.35□□□□□ -1.23
SMG6-210ENST00000572205 ANKRD34BA5PLL1 514 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 IQCF6A8MYZ5 107 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 FAM157AC9JC47 383 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 H3BN98 237 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 PRODHO43272 600 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 SELENOFO60613 162 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 RGS9O75916 674 aaPredicted RBP7.34□□□□□ -1.23
SMG6-210ENST00000572205 GLCEO94923 617 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 PTBP3O95758 552 aaKnown RBP7.34□□□□□ -1.23
SMG6-210ENST00000572205 RAC2P15153 192 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 ZNF3P17036 446 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 POLR2IP36954 125 aaKnown RBP7.34□□□□□ -1.23
SMG6-210ENST00000572205 OPRL1P41146 370 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 CRYBB2P43320 205 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 RASSF2P50749 326 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 ZNF81P51508 661 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 CRISP1P54107 249 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 RAD23AP54725 363 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 GGTLC2Q14390 218 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 GK2Q14410 553 aaPredicted RBP7.34□□□□□ -1.23
SMG6-210ENST00000572205 PTGES3Q15185 160 aaKnown RBP7.34□□□□□ -1.23
SMG6-210ENST00000572205 NKPD1Q17RQ9 610 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 ZNF718Q3SXZ3 478 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 AADACL4Q5VUY2 407 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 PLBD1Q6P4A8 553 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 DPY19L4Q7Z388 723 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 BCDIN3DQ7Z5W3 292 aaKnown RBP7.34□□□□□ -1.23
SMG6-210ENST00000572205 ICA1LQ8NDH6 482 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 CLDND2Q8NHS1 167 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 DNAJC9Q8WXX5 260 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 RDH5Q92781 318 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 SPSB4Q96A44 273 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 APOBEC3DQ96AK3 386 aaPredicted RBP7.34□□□□□ -1.23
SMG6-210ENST00000572205 CMBLQ96DG6 245 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 PKP2Q99959 881 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 SLC30A2Q9BRI3 323 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 ELOVL3Q9HB03 270 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 PAPOLBQ9NRJ5 636 aaKnown RBP7.34□□□□□ -1.23
SMG6-210ENST00000572205 PTTG3PQ9NZH4 202 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.34□□□□□ -1.23
SMG6-210ENST00000572205 CGGBP1Q9UFW8 167 aaPredicted RBP7.34□□□□□ -1.23
SMG6-210ENST00000572205 COPS3Q9UNS2 423 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 AP4S1Q9Y587 144 aa7.34□□□□□ -1.23
SMG6-210ENST00000572205 WNK2Q9Y3S1 2297 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 RIIAD1A6NNX1 92 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 ZNF878C9JN71 531 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 H0YL77 283 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 M0R135 149 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 E2F6O75461 281 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 CRLF1O75462 422 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 SRSF10O75494 262 aaKnown RBP7.33□□□□□ -1.24
SMG6-210ENST00000572205 IGLV3-1P01715 115 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 IGHV2-70P01814 119 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 ALPLP05186 524 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 SPARCP09486 303 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 SELEP16581 610 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 TUBG1P23258 451 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 RGS6P49758 472 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 CDH15P55291 814 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 ESRRGP62508 458 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 HOXA4Q00056 320 aaPredicted RBP7.33□□□□□ -1.24
SMG6-210ENST00000572205 ZNF92Q03936 586 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 PCGF3Q3KNV8 242 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 GLYATL3Q5SZD4 288 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 OR2T2Q6IF00 324 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 TMEM154Q6P9G4 183 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 USP51Q70EK9 711 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 CPOQ8IVL8 374 aa7.33□□□□□ -1.24
SMG6-210ENST00000572205 ZNF283Q8N7M2 679 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms