RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 ACSM4P0C7M7 580 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 HIST1H1CP16403 213 aaKnown RBP7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 CA6P23280 308 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 ANOS1P23352 680 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 CRABP1P29762 137 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 MDH1P40925 334 aaKnown RBP7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 RPS27P42677 84 aaKnown RBP7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 HIST1H3AP68431 136 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 POU4F2Q12837 409 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 DGCR6Q14129 220 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 KCNMB1Q16558 191 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 MIDNQ504T8 468 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 HIST2H3PS2Q5TEC6 136 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 GLYATQ6IB77 296 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 SLC18B1Q6NT16 456 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 C8orf82Q6P1X6 216 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 DNM1P34Q6PK57 102 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 FIP1L1Q6UN15 594 aaKnown RBP7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 HIST2H3AQ71DI3 136 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 NLRC3Q7RTR2 1065 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 LNX2Q8N448 690 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 FITM2Q8N6M3 262 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 SLC26A10Q8NG04 563 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 FANK1Q8TC84 345 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 SPRYD4Q8WW59 207 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 DACT3Q96B18 629 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 TECTBQ96PL2 329 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 GPX7Q96SL4 187 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 HOPXQ9BPY8 73 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 IFT27Q9BW83 186 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 HDHD2Q9H0R4 259 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 MMADHCQ9H3L0 296 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 ANKRD19PQ9H560 264 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 ZMAT3Q9HA38 289 aaKnown RBP7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 EFCAB1Q9HAE3 211 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 ARGLU1Q9NWB6 273 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 AP3M1Q9Y2T2 418 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 N6AMT1Q9Y5N5 214 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR6C68A6NDL8 312 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 POM121CA8CG34 1229 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 SLC22A2O15244 555 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 TXNDC12O95881 172 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 RENP00797 406 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 CRYBA1P05813 215 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 RHCEP18577 417 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 SLC6A6P31641 620 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 PYCR1P32322 319 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 MSX2P35548 267 aaPredicted RBP7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 GGT2P36268 569 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 PSME3P61289 254 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 COX10Q12887 443 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 TRAP1Q12931 704 aaKnown RBP7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 KRT72Q14CN4 511 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR8G1Q15617 311 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 RFX4Q33E94 735 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 SNAI3Q3KNW1 292 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 CLEC12AQ5QGZ9 265 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 SLC35F1Q5T1Q4 408 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 GPR157Q5UAW9 335 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 LYPD4Q6UWN0 246 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 ZNF841Q6ZN19 808 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 DCDC5Q6ZRR9 648 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 COLCA1Q6ZS62 124 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 ZNF826PQ6ZT77 177 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 C9orf139Q6ZV77 190 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 PGAP1Q75T13 922 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 MRPL21Q7Z2W9 205 aaKnown RBP7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 PDZD9Q8IXQ8 264 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 C1orf87Q8N0U7 546 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 SDR9C7Q8NEX9 313 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR11L1Q8NGX0 322 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR2AJ1Q8NGZ0 328 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR2AE1Q8NHA4 323 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 MAP6Q96JE9 813 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 C7orf34Q96L11 122 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 CHIAQ9BZP6 476 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR52D1Q9H346 318 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 PNRC2Q9NPJ4 139 aaKnown RBP7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 ADA2Q9NZK5 511 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 CTSZQ9UBR2 303 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 ATPIF1Q9UII2 106 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 TGP01266 2768 aa7.16□□□□□ -1.26
CTDNEP1-203ENST00000570385 IGHV3OR15-7A0A075B7D8 119 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 GGT3PA6NGU5 568 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 TVP23AA6NH52 213 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 CD300LBA8K4G0 201 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 SRRM5B3KS81 715 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 J3QW42 95 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 ADAM20O43506 726 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR10H3O60404 316 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 CCDC22O60826 627 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 KNG1P01042 644 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 GRPP07492 148 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 PPIAL4GP0DN37 164 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 NOS3P29474 1203 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 PSMB10P40306 273 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 RAD23AP54725 363 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 RAG2P55895 527 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 RELBQ01201 579 aa7.15□□□□□ -1.26
CTDNEP1-203ENST00000570385 SPIBQ01892 262 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms