RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 POLR3KQ9Y2Y1 108 aaPredicted RBP6.58□□□□□ -1.36
CDH3-209ENST00000569080 PPIAL4EA0A075B759 164 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 PPIAL4CA0A0B4J2A2 164 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 A0A0G2JMP0 313 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 A0A0X1KG70 313 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 DHRS12A0PJE2 317 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 ISPDA4D126 451 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 AQP12BA6NM10 295 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 CEACAM18A8MTB9 384 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 PPIAL4DF5H284 164 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 F5H5K5 113 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 F5H5P2 479 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 TMEM178BH3BS89 294 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 J3QLI3 93 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 M0R135 149 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 SURF4O15260 269 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 TCF21O43680 179 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 VENTXO95231 258 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 FSTL3O95633 263 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 PTBP3O95758 552 aaKnown RBP6.57□□□□□ -1.36
CDH3-209ENST00000569080 HLA-DQA2P01906 255 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 PPIAL4FP0DN26 164 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 ANPEPP15144 967 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 TNFRSF1AP19438 455 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 TNFSF4P23510 183 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 SRP14P37108 136 aaKnown RBP6.57□□□□□ -1.36
CDH3-209ENST00000569080 PMELP40967 661 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 GATA4P43694 442 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 RAD23AP54725 363 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 PAX2Q02962 417 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 MAB21L1Q13394 359 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 GK3PQ14409 553 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 ZNF181Q2M3W8 571 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 TEX30Q5JUR7 227 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 TRPM8Q7Z2W7 1104 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 DCXRQ7Z4W1 244 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 LRRC28Q86X40 367 aaPredicted RBP6.57□□□□□ -1.36
CDH3-209ENST00000569080 AQP12AQ8IXF9 295 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 HS3ST5Q8IZT8 346 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 IQCF1Q8N6M8 205 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 ZNF511Q8NB15 262 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 DEFB108BQ8NET1 73 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 OR4M2Q8NGB6 313 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 OR5L1Q8NGL2 311 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 OR13G1Q8NGZ3 307 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 ZNF420Q8TAQ5 688 aaPredicted RBP6.57□□□□□ -1.36
CDH3-209ENST00000569080 POP5Q969H6 163 aaKnown RBP6.57□□□□□ -1.36
CDH3-209ENST00000569080 DACT3Q96B18 629 aaPredicted RBP6.57□□□□□ -1.36
CDH3-209ENST00000569080 ZNF799Q96GE5 643 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 FEVQ99581 238 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 THTPAQ9BU02 230 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 MARCH7Q9H992 704 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 PATZ1Q9HBE1 687 aaKnown RBP6.57□□□□□ -1.36
CDH3-209ENST00000569080 MMP26Q9NRE1 261 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 CMC2Q9NRP2 79 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 UBAP1Q9NZ09 502 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 BAIAP2Q9UQB8 552 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 PPP1R3CQ9UQK1 317 aa6.57□□□□□ -1.36
CDH3-209ENST00000569080 TCRBV3S1A0A5B6 114 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 FAM183AA6NL82 134 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 TRAPPC2LH3BP13 241 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 CYB5R3P00387 301 aaPredicted RBP6.56□□□□□ -1.36
CDH3-209ENST00000569080 CST1P01037 141 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 HLA-DPB1P04440 258 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 SPARCP09486 303 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 ZNF823P16415 610 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 ADRA2CP18825 462 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 EPHA1P21709 976 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 GATA3P23771 443 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 GRK5P34947 590 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 CD200P41217 278 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 SLC6A9P48067 706 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 ENTPD1P49961 510 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 LCN2P80188 198 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 HOXA4Q00056 320 aaPredicted RBP6.56□□□□□ -1.36
CDH3-209ENST00000569080 ZNF92Q03936 586 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 GLYATL3Q5SZD4 288 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 DCAF12L2Q5VW00 463 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 FAHD2BQ6P2I3 314 aaPredicted RBP6.56□□□□□ -1.36
CDH3-209ENST00000569080 DRAM2Q6UX65 266 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 PRSS45Q7RTY3 260 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 PEG10Q86TG7 708 aaKnown RBP6.56□□□□□ -1.36
CDH3-209ENST00000569080 TIGD4Q8IY51 512 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 SPICQ8N5J4 248 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 CELF2-AS1Q8N7Q2 184 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 ATG16L2Q8NAA4 619 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 PAPD5Q8NDF8 572 aaKnown RBP6.56□□□□□ -1.36
CDH3-209ENST00000569080 OR2AJ1Q8NGZ0 328 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 OR2AE1Q8NHA4 323 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 Q8TCH9 128 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 SPSB4Q96A44 273 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 SLCO4A1Q96BD0 722 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 SLAMF6Q96DU3 332 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 FAHD2AQ96GK7 314 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 ZNF582Q96NG8 517 aaPredicted RBP6.56□□□□□ -1.36
CDH3-209ENST00000569080 AMELYQ99218 206 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 REPIN1Q9BWE0 567 aaKnown RBP6.56□□□□□ -1.36
CDH3-209ENST00000569080 CDADC1Q9BWV3 514 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 MED20Q9H944 212 aa6.56□□□□□ -1.36
CDH3-209ENST00000569080 A0A0A6YYJ9 748 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms