RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499		B9A039	149 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	LOC110117498-PIK3R3	F6TDL0	507 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499		J3QLW9	94 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	TBX1	O43435	398 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	XRCC2	O43543	280 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	NGF	P01138	241 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	MT-ND5	P03915	603 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SELE	P16581	610 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ZNF19	P17023	458 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CFL1	P23528	166 aa	Known RBP	12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	EEF1B2	P24534	225 aa	Known RBP	12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	TTK	P33981	857 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	EVX1	P49640	407 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	KLF3	P57682	345 aa	Predicted RBP	12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	TIGD6	Q17RP2	521 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CDON	Q4KMG0	1287 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	LAIR2	Q6ISS4	152 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	COLCA1	Q6ZS62	124 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	RFPL4B	Q6ZWI9	263 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	FAM57B	Q71RH2	274 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SSX6	Q7RTT6	188 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SYS1	Q8N2H4	156 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	KLHL36	Q8N4N3	616 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	RFLNB	Q8N5W9	214 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SLC25A40	Q8TBP6	338 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	TMEM171	Q8WVE6	324 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	OR2J1	Q9GZK6	312 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	RGCC	Q9H4X1	137 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PLEKHF2	Q9H8W4	249 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	BRD7	Q9NPI1	651 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	MRM2	Q9UI43	246 aa	Known RBP	12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	DUSP13	Q9UII6	198 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ZNF391	Q9UJN7	358 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	GTF2A1L	Q9UNN4	478 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ERGIC3	Q9Y282	383 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	STARD10	Q9Y365	291 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CAB39	Q9Y376	341 aa	Predicted RBP	12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	LRRC42	Q9Y546	428 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SNX5	Q9Y5X3	404 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499		R4GMQ9	66 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PRR14L	Q5THK1	2151 aa		12.83	□□□□□ -0.36
KLHDC4-223	ENST00000568499	GPRIN2	O60269	458 aa		12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	RPP14	O95059	124 aa	Known RBP	12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SLC2A1	P11166	492 aa		12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	MMP16	P51512	607 aa		12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	GBX2	P52951	348 aa	Predicted RBP	12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SNRPD2	P62316	118 aa	Known RBP	12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	EFNB3	Q15768	340 aa		12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ADIPOQ	Q15848	244 aa		12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	TP53I3	Q53FA7	332 aa		12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SPATA46	Q5T0L3	261 aa		12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	LIPN	Q5VXI9	398 aa		12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	MBNL2	Q5VZF2	373 aa	Known RBP	12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	MRPL21	Q7Z2W9	205 aa	Known RBP	12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	KLF14	Q8TD94	323 aa	Predicted RBP	12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	MRPL24	Q96A35	216 aa	Known RBP	12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	C4orf36	Q96KX1	117 aa		12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CBLN4	Q9NTU7	201 aa		12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PTTG3P	Q9NZH4	202 aa		12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PMF1-BGLAP	U3KQ54	211 aa		12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499	HEATR1	Q9H583	2144 aa	Known RBP	12.82	□□□□□ -0.36
KLHDC4-223	ENST00000568499		A0A1W2PPR1	153 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499		A0A1W2PPW3	197 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	MYL12B	O14950	172 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	RGS10	O43665	173 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CDK1	P06493	297 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	RPSA	P08865	295 aa	Known RBP	12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	RAC2	P15153	192 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ZNF250	P15622	560 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CRHBP	P24387	322 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	OR12D2	P58182	307 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ZNF684	Q5T5D7	378 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	BCL2L15	Q5TBC7	163 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PGAP1	Q75T13	922 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	NAA40	Q86UY6	237 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PIGT	Q969N2	578 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ITFG2	Q969R8	447 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CMBL	Q96DG6	245 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	MARS2	Q96GW9	593 aa	Known RBP	12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	CCL19	Q99731	98 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	FKBP14	Q9NWM8	211 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PCDHGB5	Q9Y5G0	923 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	HECTD1	Q9ULT8	2610 aa		12.81	□□□□□ -0.36
KLHDC4-223	ENST00000568499	BAHCC1	Q9P281	2608 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ABCA4	P78363	2273 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PLSCR5	A0PG75	271 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PRR32	B1ATL7	298 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	MAGEB4	O15481	346 aa	Predicted RBP	12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	TIMM8A	O60220	97 aa	Predicted RBP	12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ERCC1	P07992	297 aa	Predicted RBP	12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	HTR1A	P08908	422 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	LIMS3	P0CW19	117 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	LIMS4	P0CW20	117 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	PRF1	P14222	555 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	LIPA	P38571	399 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ETV1	P50549	477 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	ERVS71-1	P61550	626 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SLC35A2	P78381	396 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	NKPD1	Q17RQ9	610 aa		12.8	□□□□□ -0.36
KLHDC4-223	ENST00000568499	SNAI3	Q3KNW1	292 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms