RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 SLC6A9P48067 706 aa15.44■□□□□ 0.06
COMMD4-222ENST00000568034 MVKQ03426 396 aa15.44■□□□□ 0.06
COMMD4-222ENST00000568034 SWI5Q1ZZU3 235 aa15.44■□□□□ 0.06
COMMD4-222ENST00000568034 CDONQ4KMG0 1287 aa15.44■□□□□ 0.06
COMMD4-222ENST00000568034 KLHL22Q53GT1 634 aa15.44■□□□□ 0.06
COMMD4-222ENST00000568034 PLEKHG7Q6ZR37 379 aa15.44■□□□□ 0.06
COMMD4-222ENST00000568034 BPIFB6Q8NFQ5 453 aa15.44■□□□□ 0.06
COMMD4-222ENST00000568034 RNF166Q96A37 237 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-222ENST00000568034 MROQ9BYG7 248 aa15.44■□□□□ 0.06
COMMD4-222ENST00000568034 NIPAL2Q9H841 368 aa15.44■□□□□ 0.06
COMMD4-222ENST00000568034 FAM206AQ9NX38 181 aa15.44■□□□□ 0.06
COMMD4-222ENST00000568034 ZNF319Q9P2F9 582 aa15.44■□□□□ 0.06
COMMD4-222ENST00000568034 IKZF2Q9UKS7 526 aa15.44■□□□□ 0.06
COMMD4-222ENST00000568034 PCDHGB1Q9Y5G3 927 aa15.44■□□□□ 0.06
COMMD4-222ENST00000568034 ARFGEF3Q5TH69 2177 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 DAPL1A0PJW8 107 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 DENRO43583 198 aaKnown RBP15.43■□□□□ 0.06
COMMD4-222ENST00000568034 SULT1C4O75897 302 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 CLPTM1O96005 669 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 PNPP00491 289 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 LIMS3P0CW19 117 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 LIMS4P0CW20 117 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 RIDAP52758 137 aaKnown RBP15.43■□□□□ 0.06
COMMD4-222ENST00000568034 MFGE8Q08431 387 aaPredicted RBP15.43■□□□□ 0.06
COMMD4-222ENST00000568034 MBNL2Q5VZF2 373 aaKnown RBP15.43■□□□□ 0.06
COMMD4-222ENST00000568034 UNQ6126/PRO20091Q6UXV3 157 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.43■□□□□ 0.06
COMMD4-222ENST00000568034 C1orf174Q8IYL3 243 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 FBXL14Q8N1E6 418 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 KLF14Q8TD94 323 aaPredicted RBP15.43■□□□□ 0.06
COMMD4-222ENST00000568034 SYT3Q9BQG1 590 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 PLK3Q9H4B4 646 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 INPP5EQ9NRR6 644 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 CBLN4Q9NTU7 201 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 PAK1IP1Q9NWT1 392 aaPredicted RBP15.43■□□□□ 0.06
COMMD4-222ENST00000568034 ERVK13-1Q9NX77 482 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 UBAP1Q9NZ09 502 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 CNOT2Q9NZN8 540 aaKnown RBP15.43■□□□□ 0.06
COMMD4-222ENST00000568034 ST6GALNAC2Q9UJ37 374 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 LAMP3Q9UQV4 416 aa15.43■□□□□ 0.06
COMMD4-222ENST00000568034 NAV2Q8IVL1 2488 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 METTL15A6NJ78 407 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 H3BSA7 217 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 FAM20BO75063 409 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 ANXA2P07355 339 aaKnown RBP15.42■□□□□ 0.06
COMMD4-222ENST00000568034 GALEQ14376 348 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 TP53I3Q53FA7 332 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 GLYATL3Q5SZD4 288 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 FBXW12Q6X9E4 464 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 FAM57BQ71RH2 274 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 LHFPL3Q86UP9 236 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 SGCDQ92629 289 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 ALG8Q9BVK2 526 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 ACOXLQ9NUZ1 547 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 FAIMQ9NVQ4 179 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 PTTG3PQ9NZH4 202 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 DIMT1Q9UNQ2 313 aaKnown RBP15.42■□□□□ 0.06
COMMD4-222ENST00000568034 PLEKHA6Q9Y2H5 1048 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 NOTCH2Q04721 2471 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 TACC2O95359 2948 aa15.42■□□□□ 0.06
COMMD4-222ENST00000568034 LRBAP50851 2863 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 IRGMA1A4Y4 181 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 EFCAB10A6NFE3 127 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 B9A039 149 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 OVOL3O00110 214 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 APOC1P02654 83 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 RAF1P04049 648 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 KRT8P05787 483 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 TUBG1P23258 451 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 DCKP27707 260 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 EVX1P49640 407 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 ETV1P50549 477 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 MMP16P51512 607 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 OR12D2P58182 307 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 ST3GAL4Q11206 333 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 PSG7Q13046 419 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 HLXQ14774 488 aaPredicted RBP15.41■□□□□ 0.06
COMMD4-222ENST00000568034 ALKBH6Q3KRA9 238 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 ZNF718Q3SXZ3 478 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 AGAP6Q5VW22 663 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 LIPNQ5VXI9 398 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 AHSA2Q719I0 299 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 OR5L1Q8NGL2 311 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 OR2AE1Q8NHA4 323 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 SYNPRQ8TBG9 265 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 SNX33Q8WV41 574 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 COG8Q96MW5 612 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 CCL19Q99731 98 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 BRD7Q9NPI1 651 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 TUBG2Q9NRH3 451 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 R4GMQ9 66 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 USF3Q68DE3 2245 aa15.41■□□□□ 0.06
COMMD4-222ENST00000568034 IGHV3-13P01766 116 aa15.4■□□□□ 0.06
COMMD4-222ENST00000568034 CCDC159P0C7I6 412 aa15.4■□□□□ 0.06
COMMD4-222ENST00000568034 PRSS12P56730 875 aa15.4■□□□□ 0.06
COMMD4-222ENST00000568034 KLF3P57682 345 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-222ENST00000568034 CSNK2BP67870 215 aa15.4■□□□□ 0.06
COMMD4-222ENST00000568034 SLC35A2P78381 396 aa15.4■□□□□ 0.06
COMMD4-222ENST00000568034 ZNF92Q03936 586 aa15.4■□□□□ 0.06
COMMD4-222ENST00000568034 GK2Q14410 553 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms