RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 LOC110117498-PIK3R3F6TDL0 507 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 H3BQF6 201 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 SULT2B1O00204 365 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 CDC7O00311 574 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 TBX19O60806 448 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 SCGB2A1O75556 95 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 DIRAS3O95661 229 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 IFNA10P01566 189 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 IFNA6P05013 189 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 PCCBP05166 539 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 CRYGCP07315 174 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 LINC00614P0C842 121 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF735P0CB33 412 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 DUX4L2P0CJ85 424 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 DUX4L3P0CJ86 424 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 DUX4L5P0CJ88 424 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 DUX4L6P0CJ89 424 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 DUX4L7P0CJ90 424 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 DBTP11182 482 aaKnown RBP2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 NQO1P15559 274 aaKnown RBP2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 CD36P16671 472 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 TBXA2RP21731 343 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 HNRNPA2B1P22626 353 aaKnown RBP2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 DTYMKP23919 212 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 TEAD1P28347 426 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 CRABP1P29762 137 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 OTX1P32242 354 aaPredicted RBP2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 OTX2P32243 289 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 SLCO1A2P46721 670 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 RPL5P46777 297 aaKnown RBP2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 OMPP47874 163 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 CRYBB1P53674 252 aaPredicted RBP2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 PRMT2P55345 433 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 PKNOX1P55347 436 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 C21orf59P57076 290 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 RGS8P57771 180 aaPredicted RBP2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 AP3S2P59780 193 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 ESRRGP62508 458 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 VSNL1P62760 191 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 CHRNB3Q05901 458 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 LRRC63Q05C16 580 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 CYP24A1Q07973 514 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 SELPLGQ14242 412 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 GOLGA7BQ2TAP0 167 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 XKR4Q5GH76 650 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 SPANXN2Q5MJ10 180 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 PPM1LQ5SGD2 360 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 BEND3Q5T5X7 828 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 PIP5KL1Q5T9C9 394 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 LIPNQ5VXI9 398 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 RPL13AP3Q6NVV1 102 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 DHRS4L2Q6PKH6 230 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 CERS6Q6ZMG9 384 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 LINC00299Q6ZSB3 139 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF767PQ75MW2 155 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 ARMCX2Q7L311 632 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 APTXQ7Z2E3 356 aaKnown RBP2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 PAGE2Q7Z2X7 111 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 DPY19L4Q7Z388 723 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 TMEM17Q86X19 198 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 C10orf107Q8IVU9 208 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 NELFCDQ8IXH7 590 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 FAM58AQ8N1B3 248 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF786Q8N393 782 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 STX19Q8N4C7 294 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF561Q8N587 486 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF433Q8N7K0 673 aaPredicted RBP2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 OR52I1Q8NGK6 324 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 OR2T34Q8NGX1 318 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 OR2T3Q8NH03 318 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 YIPF5Q969M3 257 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 SGTBQ96EQ0 304 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 PLEKHA8Q96JA3 519 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 SERPINB11Q96P15 392 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 TAAR1Q96RJ0 339 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 ARHGDIGQ99819 225 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 SLC6A7Q99884 636 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 AIF1LQ9BQI0 150 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 ACBD6Q9BR61 282 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 TMED9Q9BVK6 235 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF416Q9BWM5 594 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 MFFQ9GZY8 342 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 VCX2Q9H322 139 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 NXF3Q9H4D5 531 aaKnown RBP2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 RMND5AQ9H871 391 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 COQ10BQ9H8M1 238 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 CYP3A43Q9HB55 503 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 ASCL3Q9NQ33 180 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 BIN3Q9NQY0 253 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 THUMPD1Q9NXG2 353 aaKnown RBP2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 USE1Q9NZ43 259 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 MAT2BQ9NZL9 334 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 PEF1Q9UBV8 284 aaKnown RBP2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 CTSFQ9UBX1 484 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 DUX4Q9UBX2 424 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 PRO0461Q9UI25 63 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 PYCARDQ9ULZ3 195 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 ERVW-1Q9UQF0 538 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 NDUFAF1Q9Y375 327 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 PLXNA1Q9UIW2 1896 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms