RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 C17orf50Q8WW18 174 aa11.16□□□□□ -0.62
SMG1-213ENST00000567737 SLC7A6Q92536 515 aa11.16□□□□□ -0.62
SMG1-213ENST00000567737 VPS33AQ96AX1 596 aa11.16□□□□□ -0.62
SMG1-213ENST00000567737 APOPT1Q96IL0 206 aa11.16□□□□□ -0.62
SMG1-213ENST00000567737 WFDC6Q9BQY6 131 aa11.16□□□□□ -0.62
SMG1-213ENST00000567737 ALG12Q9BV10 488 aa11.16□□□□□ -0.62
SMG1-213ENST00000567737 HCAR1Q9BXC0 346 aa11.16□□□□□ -0.62
SMG1-213ENST00000567737 PRSS22Q9GZN4 317 aa11.16□□□□□ -0.62
SMG1-213ENST00000567737 MEGF9Q9H1U4 602 aa11.16□□□□□ -0.62
SMG1-213ENST00000567737 RAD21L1Q9H4I0 556 aa11.16□□□□□ -0.62
SMG1-213ENST00000567737 EVA1AQ9H8M9 152 aa11.16□□□□□ -0.62
SMG1-213ENST00000567737 MEGF11A6BM72 1044 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 VIMP08670 466 aaKnown RBP11.15□□□□□ -0.62
SMG1-213ENST00000567737 CCDC159P0C7I6 412 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 BGNP21810 368 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 AQP2P41181 271 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 DGCR2P98153 550 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 FADDQ13158 208 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 FAM90A1Q86YD7 464 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 FGFRL1Q8N441 504 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 ZNF781Q8N8C0 355 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 OR5AU1Q8NGC0 362 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 APOBEC3DQ96AK3 386 aaPredicted RBP11.15□□□□□ -0.62
SMG1-213ENST00000567737 MCRIP2Q9BUT9 160 aaKnown RBP11.15□□□□□ -0.62
SMG1-213ENST00000567737 CDCA4Q9BXL8 241 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 RMND5AQ9H871 391 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 EMC7Q9NPA0 242 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 POLE4Q9NR33 117 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 AIG1Q9NVV5 245 aa11.15□□□□□ -0.62
SMG1-213ENST00000567737 SF3B6Q9Y3B4 125 aaKnown RBP11.15□□□□□ -0.62
SMG1-213ENST00000567737 TSSC4Q9Y5U2 329 aaPredicted RBP11.15□□□□□ -0.62
SMG1-213ENST00000567737 TRBV23-1A0A0A0MS06 115 aa11.14□□□□□ -0.63
SMG1-213ENST00000567737 TCRBV4S1A1TA0A5B7 111 aa11.14□□□□□ -0.63
SMG1-213ENST00000567737 CPSF4LA6NMK7 179 aaKnown RBP11.14□□□□□ -0.63
SMG1-213ENST00000567737 ALDOBP05062 364 aa11.14□□□□□ -0.63
SMG1-213ENST00000567737 IL6P05231 212 aa11.14□□□□□ -0.63
SMG1-213ENST00000567737 VDAC2P45880 294 aaPredicted RBP11.14□□□□□ -0.63
SMG1-213ENST00000567737 ECH1Q13011 328 aa11.14□□□□□ -0.63
SMG1-213ENST00000567737 TOP3AQ13472 1001 aaPredicted RBP11.14□□□□□ -0.63
SMG1-213ENST00000567737 ENTPD8Q5MY95 495 aa11.14□□□□□ -0.63
SMG1-213ENST00000567737 ZFAND6Q6FIF0 208 aa11.14□□□□□ -0.63
SMG1-213ENST00000567737 REEP3Q6NUK4 255 aa11.14□□□□□ -0.63
SMG1-213ENST00000567737 CCDC121Q6ZUS5 278 aa11.14□□□□□ -0.63
SMG1-213ENST00000567737 MUC13Q9H3R2 512 aa11.14□□□□□ -0.63
SMG1-213ENST00000567737 METTL8Q9H825 291 aaKnown RBP11.14□□□□□ -0.63
SMG1-213ENST00000567737 DNAH7Q8WXX0 4024 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 NPIPB13A6NJU9 1138 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 NPIPB4C9JG80 1138 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 M0R3H8 397 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 F2RL2O00254 374 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 SERPINB7O75635 380 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 SERPINE1P05121 402 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 ALDOCP09972 364 aaKnown RBP11.13□□□□□ -0.63
SMG1-213ENST00000567737 FUT1P19526 365 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 BLMHQ13867 455 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 CNN3Q15417 329 aaKnown RBP11.13□□□□□ -0.63
SMG1-213ENST00000567737 OR8G1Q15617 311 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 C6orf10Q5SRN2 563 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 OGFOD2Q6N063 350 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 LINC00482Q8N8I6 264 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 OR1F12Q8NHA8 337 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 MOSPD2Q8NHP6 518 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 ITCHQ96J02 903 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 MPP4Q96JB8 637 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 RCHY1Q96PM5 261 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 TXNIPQ9H3M7 391 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 WDR76Q9H967 626 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 SLC7A7Q9UM01 511 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 AURKCQ9UQB9 309 aa11.13□□□□□ -0.63
SMG1-213ENST00000567737 NOP16Q9Y3C1 178 aaKnown RBP11.13□□□□□ -0.63
SMG1-213ENST00000567737 LSM4Q9Y4Z0 139 aaKnown RBP11.13□□□□□ -0.63
SMG1-213ENST00000567737 IGHV3OR15-7A0A075B7D8 119 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 A0A1B0GW55 424 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 H0YHG0 523 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 CLIC1O00299 241 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 NDUFB3O43676 98 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 RAMP3O60896 148 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 THY1P04216 161 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 SCG5P05408 212 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 DBHP09172 617 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 DUX4L2P0CJ85 424 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 DUX4L3P0CJ86 424 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 DUX4L4P0CJ87 422 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 DUX4L5P0CJ88 424 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 DUX4L6P0CJ89 424 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 DUX4L7P0CJ90 424 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 PAX6P26367 422 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 CDK6Q00534 326 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 GCNT6Q5T4J0 391 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 TEX36Q5VZQ5 186 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 DUX4L9Q6RFH8 374 aaPredicted RBP11.12□□□□□ -0.63
SMG1-213ENST00000567737 SLC36A1Q7Z2H8 476 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 ARMC8Q8IUR7 673 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 GCSAMQ8N6F7 178 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 ADAMTS16Q8TE57 1224 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 H1FXQ92522 213 aaKnown RBP11.12□□□□□ -0.63
SMG1-213ENST00000567737 TFAP2CQ92754 450 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 CCL13Q99616 98 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 PPCSQ9HAB8 311 aa11.12□□□□□ -0.63
SMG1-213ENST00000567737 C1orf123Q9NWV4 160 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms