RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	BAIAP2	Q9UQB8	552 aa		5.85	□□□□□ -1.47
SF3B3-209	ENST00000567635	PPP1R3C	Q9UQK1	317 aa		5.85	□□□□□ -1.47
SF3B3-209	ENST00000567635	SAMHD1	Q9Y3Z3	626 aa	Known RBP	5.85	□□□□□ -1.47
SF3B3-209	ENST00000567635	NPTN	Q9Y639	398 aa		5.85	□□□□□ -1.47
SF3B3-209	ENST00000567635		U3KQV3	271 aa		5.85	□□□□□ -1.47
SF3B3-209	ENST00000567635	ISPD	A4D126	451 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	TVP23A	A6NH52	213 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635		A6NHS1	94 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	IQCF6	A8MYZ5	107 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	ZNF593	O00488	134 aa	Predicted RBP	5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	GNGT2	O14610	69 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	CIB2	O75838	187 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	CST1	P01037	141 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	IGHV2-70	P01814	119 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	LCAT	P04180	440 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	SELE	P16581	610 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	HOXB6	P17509	224 aa	Known RBP	5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	FMO3	P31513	532 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	SRP9	P49458	86 aa	Known RBP	5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	SLC25A1	P53007	311 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	TPTE	P56180	551 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	MALL	Q13021	153 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	SHQ1	Q6PI26	577 aa	Known RBP	5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	LRRC28	Q86X40	367 aa	Predicted RBP	5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	PHC2	Q8IXK0	858 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	RFLNB	Q8N5W9	214 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	TEX29	Q8N6K0	151 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	ZNF283	Q8N7M2	679 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	ZNF511	Q8NB15	262 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	SLC37A3	Q8NCC5	494 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	OR51L1	Q8NGJ5	315 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	OR8D4	Q8NGM9	314 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	ST7L	Q8TDW4	575 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	GIPC3	Q8TF64	312 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	ITLN1	Q8WWA0	313 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	ZNRF4	Q8WWF5	429 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	SPTSSA	Q969W0	71 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	CCDC124	Q96CT7	223 aa	Known RBP	5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	MAP6	Q96JE9	813 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	CLPTM1L	Q96KA5	538 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	OR2V2	Q96R30	315 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	FEV	Q99581	238 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	GAL3ST1	Q99999	423 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	SLC30A2	Q9BRI3	323 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	RBM4	Q9BWF3	364 aa	Known RBP	5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	CHID1	Q9BWS9	393 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	PLA2G12A	Q9BZM1	189 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	NMNAT2	Q9BZQ4	307 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	METTL17	Q9H7H0	456 aa	Predicted RBP	5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	PNRC2	Q9NPJ4	139 aa	Known RBP	5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	G6PC2	Q9NQR9	355 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635	BLOC1S6	Q9UL45	172 aa		5.84	□□□□□ -1.47
SF3B3-209	ENST00000567635		A0A0A6YYJ9	748 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635		A0A0G2JMP0	313 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635		A0A0X1KG70	313 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	AQP12B	A6NM10	295 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	RIIAD1	A6NNX1	92 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635		H0YL77	283 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	TMEM178B	H3BS89	294 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635		J3QLI3	93 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	TCF21	O43680	179 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	SOX14	O95416	240 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	PNP	P00491	289 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	IFNG	P01579	166 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	GATA3	P23771	443 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	ENTPD1	P49961	510 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	ERF	P50548	548 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	BLVRA	P53004	296 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	ACTR3	P61158	418 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	LCN2	P80188	198 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	SCGB2A2	Q13296	93 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	CRMP1	Q14194	572 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	GK2	Q14410	553 aa	Predicted RBP	5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	KPNB1	Q14974	876 aa	Known RBP	5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	TAF13	Q15543	124 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	KRTAP24-1	Q3LI83	254 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	TMEM155	Q4W5P6	130 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	TEX30	Q5JUR7	227 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	DCAF12L2	Q5VW00	463 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	DCXR	Q7Z4W1	244 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	AQP12A	Q8IXF9	295 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	ADGRG5	Q8IZF4	528 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	KLHL36	Q8N4N3	616 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	SPIC	Q8N5J4	248 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	BHLHE23	Q8NDY6	225 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR2T33	Q8NG76	320 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR4M2	Q8NGB6	313 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR10G2	Q8NGC3	310 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR10S1	Q8NGN2	331 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR9Q1	Q8NGQ5	310 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR4Q3	Q8NH05	313 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	CANT1	Q8WVQ1	401 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	SLCO4A1	Q96BD0	722 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	MEGF10	Q96KG7	1140 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	WDR76	Q9H967	626 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	GCM1	Q9NP62	436 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	CENPM	Q9NSP4	180 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	ARMC1	Q9NVT9	282 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	DCAF16	Q9NXF7	216 aa		5.83	□□□□□ -1.48
SF3B3-209	ENST00000567635	UBAP1	Q9NZ09	502 aa		5.83	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms