RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 THTPAQ9BU02 230 aa12.33□□□□□ -0.44
FANCA-220ENST00000566409 CHID1Q9BWS9 393 aa12.33□□□□□ -0.44
FANCA-220ENST00000566409 DDX28Q9NUL7 540 aaKnown RBP12.33□□□□□ -0.44
FANCA-220ENST00000566409 OPN4Q9UHM6 478 aa12.33□□□□□ -0.44
FANCA-220ENST00000566409 KCNG2Q9UJ96 466 aa12.33□□□□□ -0.44
FANCA-220ENST00000566409 COMMD3-BMI1R4GMX3 469 aa12.33□□□□□ -0.44
FANCA-220ENST00000566409 A0A0G2JMP0 313 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 A0A0X1KG70 313 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 F5H5P2 479 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 TCF21O43680 179 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 VENTXO95231 258 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 LCATP04180 440 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 HLA-DPB1P04440 258 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 RAP2AP10114 183 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 ZNF823P16415 610 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 SPI1P17947 270 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 ADRA2CP18825 462 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 OTX1P32242 354 aaPredicted RBP12.32□□□□□ -0.44
FANCA-220ENST00000566409 PMELP40967 661 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 BTG1P62324 171 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 PCK2Q16822 640 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 SNAI3Q3KNW1 292 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 LINC01590Q5TEZ4 76 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 CD300LDQ6UXZ3 194 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 OR4M2Q8NGB6 313 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 OR10G2Q8NGC3 310 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 CANT1Q8WVQ1 401 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 SLCO4A1Q96BD0 722 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 FEVQ99581 238 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 HCAR1Q9BXC0 346 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 MMP26Q9NRE1 261 aa12.32□□□□□ -0.44
FANCA-220ENST00000566409 M0R135 149 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 SURF4O15260 269 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 ZNF205O95201 554 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 SLC25A1P53007 311 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 TPTEP56180 551 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 MAB21L1Q13394 359 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 TMEM155Q4W5P6 130 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 LIPNQ5VXI9 398 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 SLC27A4Q6P1M0 643 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 TRPM8Q7Z2W7 1104 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 DCXRQ7Z4W1 244 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 IQCF1Q8N6M8 205 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 OR2T33Q8NG76 320 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 SLC7A6OSQ96CW6 309 aaPredicted RBP12.31□□□□□ -0.44
FANCA-220ENST00000566409 ZNF799Q96GE5 643 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 REPIN1Q9BWE0 567 aaKnown RBP12.31□□□□□ -0.44
FANCA-220ENST00000566409 OCEL1Q9H607 264 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 MED20Q9H944 212 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 PATZ1Q9HBE1 687 aaKnown RBP12.31□□□□□ -0.44
FANCA-220ENST00000566409 BAIAP2Q9UQB8 552 aa12.31□□□□□ -0.44
FANCA-220ENST00000566409 FAM183AA6NL82 134 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 AQP12BA6NM10 295 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 F5H0A9 414 aaPredicted RBP12.3□□□□□ -0.44
FANCA-220ENST00000566409 TRAPPC2LH3BP13 241 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 ZNF593O00488 134 aaPredicted RBP12.3□□□□□ -0.44
FANCA-220ENST00000566409 CYB5R3P00387 301 aaPredicted RBP12.3□□□□□ -0.44
FANCA-220ENST00000566409 CST1P01037 141 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 FSHBP01225 129 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 FMO3P31513 532 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 SLC6A9P48067 706 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 ENTPD1P49961 510 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 ZNF92Q03936 586 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 DCAF12L2Q5VW00 463 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 SHQ1Q6PI26 577 aaKnown RBP12.3□□□□□ -0.44
FANCA-220ENST00000566409 C1QL2Q7Z5L3 287 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 MOGAT3Q86VF5 341 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 AQP12AQ8IXF9 295 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 OR2AE1Q8NHA4 323 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 ST7LQ8TDW4 575 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 GIPC3Q8TF64 312 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 POP5Q969H6 163 aaKnown RBP12.3□□□□□ -0.44
FANCA-220ENST00000566409 LRGUKQ96M69 825 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 C7orf69Q9H7B7 122 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 TMEM165Q9HC07 324 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 CMC2Q9NRP2 79 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 TMEM100Q9NV29 134 aa12.3□□□□□ -0.44
FANCA-220ENST00000566409 POLR3KQ9Y2Y1 108 aaPredicted RBP12.3□□□□□ -0.44
FANCA-220ENST00000566409 DHRS12A0PJE2 317 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 ARRDC5A6NEK1 342 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 J3QLI3 93 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 RGS9O75916 674 aaPredicted RBP12.29□□□□□ -0.44
FANCA-220ENST00000566409 SPARCP09486 303 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 MDH2P40926 338 aaKnown RBP12.29□□□□□ -0.44
FANCA-220ENST00000566409 SRP9P49458 86 aaKnown RBP12.29□□□□□ -0.44
FANCA-220ENST00000566409 HOXA4Q00056 320 aaPredicted RBP12.29□□□□□ -0.44
FANCA-220ENST00000566409 TEX30Q5JUR7 227 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 FAM201AQ5SY85 155 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 GLYATL3Q5SZD4 288 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 PGAP1Q75T13 922 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 HS3ST5Q8IZT8 346 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 KLHL36Q8N4N3 616 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 SPICQ8N5J4 248 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 DEFB108BQ8NET1 73 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 SEMA6DQ8NFY4 1073 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 SPTSSAQ969W0 71 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 SLAMF6Q96DU3 332 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 PCDHB10Q9UN67 800 aa12.29□□□□□ -0.44
FANCA-220ENST00000566409 PPIAL4EA0A075B759 164 aa12.28□□□□□ -0.44
FANCA-220ENST00000566409 PPIAL4CA0A0B4J2A2 164 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms