RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 SLC31A1O15431 190 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 SYT7O43581 403 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 SEMA7AO75326 666 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 BTG1P62324 171 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 SLC9A3R2Q15599 337 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 FAM74A3Q4VXF1 159 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 AGAP7PQ5VUJ5 663 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 OR4C11Q6IEV9 310 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 ZNF474Q6S9Z5 364 aaPredicted RBP9.33□□□□□ -0.92
UBFD1-205ENST00000566136 SNX29P2Q8IUI4 249 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 LACC1Q8IV20 430 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 NFAM1Q8NET5 270 aaPredicted RBP9.33□□□□□ -0.92
UBFD1-205ENST00000566136 OR4C5Q8NGB2 326 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 OR4D11Q8NGI4 311 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 SLC25A43Q8WUT9 341 aaPredicted RBP9.33□□□□□ -0.92
UBFD1-205ENST00000566136 COL21A1Q96P44 957 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 AGAP4Q96P64 663 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 ENOPH1Q9UHY7 261 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 SCN3AQ9NY46 2000 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 MDC1Q14676 2089 aaKnown RBP9.33□□□□□ -0.92
UBFD1-205ENST00000566136 A0A0A6YYD5 115 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 CENPBD1B2RD01 187 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 SLC22A1O15245 554 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 SOX14O95416 240 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 CBLP22681 906 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 FEN1P39748 380 aaKnown RBP9.33□□□□□ -0.92
UBFD1-205ENST00000566136 PRDX1Q06830 199 aaKnown RBP9.33□□□□□ -0.92
UBFD1-205ENST00000566136 IKZF1Q13422 519 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 PTGES3Q15185 160 aaKnown RBP9.33□□□□□ -0.92
UBFD1-205ENST00000566136 ZSWIM7Q19AV6 140 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 CD164L2Q6UWJ8 174 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 Q71RC1 249 aaPredicted RBP9.33□□□□□ -0.92
UBFD1-205ENST00000566136 SYT14Q8NB59 555 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 OR4Q3Q8NH05 313 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 APOBEC4Q8WW27 367 aaKnown RBP9.33□□□□□ -0.92
UBFD1-205ENST00000566136 TRUB1Q8WWH5 349 aaKnown RBP9.33□□□□□ -0.92
UBFD1-205ENST00000566136 ZBED6CLQ96FA7 236 aaPredicted RBP9.33□□□□□ -0.92
UBFD1-205ENST00000566136 OR51I1Q9H343 314 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 GLIPR2Q9H4G4 154 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 A4GALTQ9NPC4 353 aa9.33□□□□□ -0.92
UBFD1-205ENST00000566136 LRIT2A6NDA9 550 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 ERI3O43414 337 aaKnown RBP9.32□□□□□ -0.92
UBFD1-205ENST00000566136 NXPH2O95156 264 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 CDK1P06493 297 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 NCBP2P52298 156 aaKnown RBP eCLIP9.32□□□□□ -0.92
UBFD1-205ENST00000566136 CRISP3P54108 245 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 RPS15AP62244 130 aaKnown RBP9.32□□□□□ -0.92
UBFD1-205ENST00000566136 NHLH2Q02577 135 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 TPBGQ13641 420 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 CRMP1Q14194 572 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 NFATC4Q14934 902 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 SPHARQ15513 63 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 TMEM249Q2WGJ8 235 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 TP53I3Q53FA7 332 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 ZNF776Q68DI1 518 aaPredicted RBP9.32□□□□□ -0.92
UBFD1-205ENST00000566136 RTL6Q6ICC9 239 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 TMEM71Q6P5X7 295 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 ABHD13Q7L211 337 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 RAB42Q8N4Z0 105 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 SLC35G5Q96KT7 338 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 UHRF2Q96PU4 802 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 DDX31Q9H8H2 851 aaKnown RBP9.32□□□□□ -0.92
UBFD1-205ENST00000566136 C12orf10Q9HB07 376 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 EFCAB9A8MZ26 197 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 G3V4G9 280 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 K7EQS6 105 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 HYAL3O43820 417 aaPredicted RBP9.32□□□□□ -0.92
UBFD1-205ENST00000566136 TPST2O60704 377 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 PTHP01270 115 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 ADRA2AP08913 450 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 PEBP1P30086 187 aaKnown RBP9.32□□□□□ -0.92
UBFD1-205ENST00000566136 CRISP1P54107 249 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 UCNP55089 124 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 RAB8AP61006 207 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 RPS21P63220 83 aaKnown RBP9.32□□□□□ -0.92
UBFD1-205ENST00000566136 C5orf64Q2M2E5 130 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 UTF1Q5T230 341 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 UBE2UQ5VVX9 321 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 SSX9Q7RTT3 188 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 CENPSQ8N2Z9 138 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 STX19Q8N4C7 294 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 WDR36Q8NI36 951 aaKnown RBP9.32□□□□□ -0.92
UBFD1-205ENST00000566136 DYNC2LI1Q8TCX1 351 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 TMEM37Q8WXS4 190 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 HGDQ93099 445 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 MYDGFQ969H8 173 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 RNF183Q96D59 192 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 SPATA25Q9BR10 227 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 ZNF251Q9BRH9 671 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 SLC17A9Q9BYT1 436 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 RANBP3Q9H6Z4 567 aaPredicted RBP9.32□□□□□ -0.92
UBFD1-205ENST00000566136 ZBTB20Q9HC78 741 aaPredicted RBP9.32□□□□□ -0.92
UBFD1-205ENST00000566136 CTPS2Q9NRF8 586 aa9.32□□□□□ -0.92
UBFD1-205ENST00000566136 MED19A0JLT2 244 aaPredicted RBP9.31□□□□□ -0.92
UBFD1-205ENST00000566136 GADD45AP24522 165 aa9.31□□□□□ -0.92
UBFD1-205ENST00000566136 CERS1P27544 350 aa9.31□□□□□ -0.92
UBFD1-205ENST00000566136 APOBEC3AP31941 199 aaPredicted RBP9.31□□□□□ -0.92
UBFD1-205ENST00000566136 CD79BP40259 229 aa9.31□□□□□ -0.92
UBFD1-205ENST00000566136 HMGA2P52926 109 aa9.31□□□□□ -0.92
UBFD1-205ENST00000566136 ST3GAL4Q11206 333 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms