RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 GRPP07492 148 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 RPS2P15880 293 aaKnown RBP5.38□□□□□ -1.55
TCF4-228ENST00000565393 ZNF12P17014 697 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 CPT2P23786 658 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 FMO3P31513 532 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 CD80P33681 288 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 PMELP40967 661 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 RPS27P42677 84 aaKnown RBP5.38□□□□□ -1.55
TCF4-228ENST00000565393 MTNR1AP48039 350 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 MMP16P51512 607 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 PRKXP51817 358 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 HMGA2P52926 109 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 UBA52P62987 128 aaKnown RBP5.38□□□□□ -1.55
TCF4-228ENST00000565393 TRAP1Q12931 704 aaKnown RBP5.38□□□□□ -1.55
TCF4-228ENST00000565393 PPP1R8Q12972 351 aaKnown RBP5.38□□□□□ -1.55
TCF4-228ENST00000565393 MAB21L1Q13394 359 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 GK2Q14410 553 aaPredicted RBP5.38□□□□□ -1.55
TCF4-228ENST00000565393 SPATS1Q496A3 300 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 FAM201AQ5SY85 155 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 SFRP4Q6FHJ7 346 aaPredicted RBP5.38□□□□□ -1.55
TCF4-228ENST00000565393 RPL13AP3Q6NVV1 102 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 PGBD2Q6P3X8 592 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 LYPD2Q6UXB3 125 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 COLCA1Q6ZS62 124 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 NLRC3Q7RTR2 1065 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 PIGWQ7Z7B1 504 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 ZBTB46Q86UZ6 589 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 KLBQ86Z14 1044 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 LNX2Q8N448 690 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 LINC00471Q8N535 108 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 ZDHHC22Q8N966 263 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 C19orf18Q8NEA5 215 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 OR8B3Q8NGG8 313 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 RAB40AQ8WXH6 277 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 DVL3Q92997 716 aaPredicted RBP5.38□□□□□ -1.55
TCF4-228ENST00000565393 NEIL1Q96FI4 390 aaPredicted RBP5.38□□□□□ -1.55
TCF4-228ENST00000565393 NSL1Q96IY1 281 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 OR8B2Q96RD0 313 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 SIGLEC11Q96RL6 698 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 TSSK6Q9BXA6 273 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 FN3KRPQ9HA64 309 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 ESM1Q9NQ30 184 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 TBC1D23Q9NUY8 699 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 ZNF69Q9UC07 566 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 CYB5R1Q9UHQ9 305 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 KCNG2Q9UJ96 466 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 POLR3KQ9Y2Y1 108 aaPredicted RBP5.38□□□□□ -1.55
TCF4-228ENST00000565393 U3KQV3 271 aa5.38□□□□□ -1.55
TCF4-228ENST00000565393 MAP1AP78559 2803 aaPredicted RBP5.38□□□□□ -1.55
TCF4-228ENST00000565393 HEATR1Q9H583 2144 aaKnown RBP5.38□□□□□ -1.55
TCF4-228ENST00000565393 CD300LBA8K4G0 201 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 M0R135 149 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 BHLHE40O14503 412 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 GNGT2O14610 69 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 MLNRO43193 412 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 TBX1O43435 398 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 GMDSO60547 372 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 GYPBP06028 91 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 SPARCP09486 303 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 SLC15A1P46059 708 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 PITPNBP48739 271 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 ZNF92Q03936 586 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 PAX8Q06710 450 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 FOXL1Q12952 345 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 OR8B8Q15620 311 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 MPPED2Q15777 294 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 KCNJ8Q15842 424 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 MICAQ29983 383 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 FAM98BQ52LJ0 330 aaKnown RBP5.37□□□□□ -1.55
TCF4-228ENST00000565393 KLF17Q5JT82 389 aaPredicted RBP5.37□□□□□ -1.55
TCF4-228ENST00000565393 GLYATL3Q5SZD4 288 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 ZNF362Q5T0B9 420 aaPredicted RBP5.37□□□□□ -1.55
TCF4-228ENST00000565393 PRAMEF6Q5VXH4 476 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 ZNF620Q6ZNG0 422 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 RASSF6Q6ZTQ3 369 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 SPATC1Q76KD6 591 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 DCXRQ7Z4W1 244 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 DHFR2Q86XF0 187 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 CELF2-AS1Q8N7Q2 184 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 ZNF511Q8NB15 262 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 AQP11Q8NBQ7 271 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 SLC37A3Q8NCC5 494 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 OR9Q2Q8NGE9 314 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 OR4C15Q8NGM1 316 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 OR9Q1Q8NGQ5 310 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 SGMS2Q8NHU3 365 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 ZNRF4Q8WWF5 429 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 ZDHHC16Q969W1 377 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 ERGIC1Q969X5 290 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 SLC25A28Q96A46 364 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 SLAMF6Q96DU3 332 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 ZNF799Q96GE5 643 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 MAP6Q96JE9 813 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 LRGUKQ96M69 825 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 NUDT16L1Q9BRJ7 211 aaKnown RBP5.37□□□□□ -1.55
TCF4-228ENST00000565393 COPS4Q9BT78 406 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 TRIM15Q9C019 465 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 SLC22A4Q9H015 551 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 RASSF4Q9H2L5 321 aa5.37□□□□□ -1.55
TCF4-228ENST00000565393 MMADHCQ9H3L0 296 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms