RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 C5orf63A6NC05 138 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 CEACAM18A8MTB9 384 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 A8MXK9 166 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 PPIAL4DF5H284 164 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 TRAPPC2LH3BP13 241 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 M0R135 149 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 FAM107AO95990 144 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 LCATP04180 440 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 PPIAL4FP0DN26 164 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 T-ENOLP0DO92 83 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 SLC6A9P48067 706 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 SRP9P49458 86 aaKnown RBP8.42□□□□□ -1.06
CMTM3-209ENST00000565003 HILS1P60008 231 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 ECH1Q13011 328 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 CRMP1Q14194 572 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 TRIM25Q14258 630 aaKnown RBP8.42□□□□□ -1.06
CMTM3-209ENST00000565003 SNAI3Q3KNW1 292 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 FAM201AQ5SY85 155 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 SLC27A4Q6P1M0 643 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 USP43Q70EL4 1123 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 MOGAT3Q86VF5 341 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 DHFR2Q86XF0 187 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 ARHGAP24Q8N264 748 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 LNX2Q8N448 690 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 LINC00471Q8N535 108 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 PROKR2Q8NFJ6 384 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 OR2T4Q8NH00 348 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 OR4Q3Q8NH05 313 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 NANPQ8TBE9 248 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 ZFAND2BQ8WV99 257 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 C22orf15Q8WYQ4 148 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 SLCO4A1Q96BD0 722 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 ZNF799Q96GE5 643 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 NSL1Q96IY1 281 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 RBM4Q9BWF3 364 aaKnown RBP8.42□□□□□ -1.06
CMTM3-209ENST00000565003 TSSK6Q9BXA6 273 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 HCAR1Q9BXC0 346 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 MUC13Q9H3R2 512 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 DDX28Q9NUL7 540 aaKnown RBP8.42□□□□□ -1.06
CMTM3-209ENST00000565003 ARMC1Q9NVT9 282 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 KCNG2Q9UJ96 466 aa8.42□□□□□ -1.06
CMTM3-209ENST00000565003 POLR3KQ9Y2Y1 108 aaPredicted RBP8.42□□□□□ -1.06
CMTM3-209ENST00000565003 SAMHD1Q9Y3Z3 626 aaKnown RBP8.42□□□□□ -1.06
CMTM3-209ENST00000565003 GYPBP06028 91 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 CLUP10909 449 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 ZNF823P16415 610 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 ZNF12P17014 697 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 CALB2P22676 271 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 OTX1P32242 354 aaPredicted RBP8.41□□□□□ -1.06
CMTM3-209ENST00000565003 PMELP40967 661 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 TPTEP56180 551 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 ZNF154Q13106 437 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 MAB21L1Q13394 359 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 MICAQ29983 383 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 ZNF181Q2M3W8 571 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 OR2T5Q6IEZ7 315 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 DCXRQ7Z4W1 244 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 MUC20Q8N307 709 aaPredicted RBP8.41□□□□□ -1.06
CMTM3-209ENST00000565003 ZNF511Q8NB15 262 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 CCDC197Q8NCU1 140 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 OR2T29Q8NH02 315 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 OR2AE1Q8NHA4 323 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 CCDC124Q96CT7 223 aaKnown RBP8.41□□□□□ -1.06
CMTM3-209ENST00000565003 CLPTM1LQ96KA5 538 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 DGCR6LQ9BY27 220 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 NMNAT2Q9BZQ4 307 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 REEP1Q9H902 201 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 TMEM165Q9HC07 324 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 ESM1Q9NQ30 184 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 TMEM100Q9NV29 134 aa8.41□□□□□ -1.06
CMTM3-209ENST00000565003 ANK2Q01484 3957 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 IFNL4K9M1U5 179 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 SPARCP09486 303 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 WNT2P09544 360 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 SLC2A1P11166 492 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 RPS2P15880 293 aaKnown RBP8.4□□□□□ -1.06
CMTM3-209ENST00000565003 SPI1P17947 270 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 GATA4P43694 442 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 ENTPD1P49961 510 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 RAD23AP54725 363 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 HOXA4Q00056 320 aaPredicted RBP8.4□□□□□ -1.06
CMTM3-209ENST00000565003 ZNF92Q03936 586 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 MALLQ13021 153 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 PCK2Q16822 640 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 FAM98BQ52LJ0 330 aaKnown RBP8.4□□□□□ -1.06
CMTM3-209ENST00000565003 ESCO2Q56NI9 601 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 KLF17Q5JT82 389 aaPredicted RBP8.4□□□□□ -1.06
CMTM3-209ENST00000565003 PRAMEF6Q5VXH4 476 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 PGAP1Q75T13 922 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 MRPL21Q7Z2W9 205 aaKnown RBP8.4□□□□□ -1.06
CMTM3-209ENST00000565003 BPIFB2Q8N4F0 458 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 OR2T33Q8NG76 320 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 OR10G2Q8NGC3 310 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 Q8TCH9 128 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 DVL3Q92997 716 aaPredicted RBP8.4□□□□□ -1.06
CMTM3-209ENST00000565003 POP5Q969H6 163 aaKnown RBP8.4□□□□□ -1.06
CMTM3-209ENST00000565003 SPTSSAQ969W0 71 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 ASB9Q96DX5 294 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 NIPSNAP1Q9BPW8 284 aa8.4□□□□□ -1.06
CMTM3-209ENST00000565003 TMEM246Q9BRR3 403 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms