RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 DDX19AQ9NUU7 478 aaKnown RBP1.37□□□□□ -2.19
CHD9-211ENST00000564600 PDP1Q9P0J1 537 aaPredicted RBP1.37□□□□□ -2.19
CHD9-211ENST00000564600 ZNRD1Q9P1U0 126 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 RABL2AQ9UBK7 228 aaPredicted RBP1.37□□□□□ -2.19
CHD9-211ENST00000564600 GGA2Q9UJY4 613 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 MRPS18BQ9Y676 258 aaKnown RBP1.37□□□□□ -2.19
CHD9-211ENST00000564600 TMEM14AQ9Y6G1 99 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 COMMD3-BMI1R4GMX3 469 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 ITGB4P16144 1822 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 YEATS2Q9ULM3 1422 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 NEURL4Q96JN8 1562 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 PHLPP2Q6ZVD8 1323 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 JCADQ9P266 1359 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 KIR2DS1A0A191URI9 304 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 SLC22A20A6NK97 555 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 F6UB75 175 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 RPL36A-HNRNPH2H7BZ11 118 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 K7EM74 188 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 ZNF701M0R085 212 aaPredicted RBP1.36□□□□□ -2.19
CHD9-211ENST00000564600 B4GALT5O43286 388 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 LSM8O95777 96 aaKnown RBP1.36□□□□□ -2.19
CHD9-211ENST00000564600 BCHEP06276 602 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 GLAP06280 429 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 CLTAP09496 248 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 CD3GP09693 182 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 ACSM4P0C7M7 580 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 CALM1P0DP23 149 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 CALM2P0DP24 149 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 CALM3P0DP25 149 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 ERGP11308 486 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 SRMP19623 302 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 USF1P22415 310 aaPredicted RBP1.36□□□□□ -2.19
CHD9-211ENST00000564600 U2AF2P26368 475 aaKnown RBP eCLIP1.36□□□□□ -2.194e-6■□□□□ 10.9
CHD9-211ENST00000564600 HTR1DP28221 377 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 CCNG1P51959 295 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 RND2P52198 227 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 VSX2P58304 361 aaPredicted RBP1.36□□□□□ -2.19
CHD9-211ENST00000564600 IRF8Q02556 426 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 ERCC8Q13216 396 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 DNAJC3Q13217 504 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 ILKQ13418 452 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 PSMD5Q16401 504 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 C5orf64Q2M2E5 130 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 CAVIN4Q5BKX8 364 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 SOHLH1Q5JUK2 328 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 TPTE2P1Q5T6R2 138 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 HES5Q5TA89 166 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 C16orf87Q6PH81 154 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 MRPL21Q7Z2W9 205 aaKnown RBP1.36□□□□□ -2.19
CHD9-211ENST00000564600 OAFQ86UD1 273 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 NT5DC3Q86UY8 548 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 CDKL3Q8IVW4 592 aaPredicted RBP1.36□□□□□ -2.19
CHD9-211ENST00000564600 FAM184AQ8NB25 1140 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 BBOF1Q8ND07 529 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 OR5W2Q8NH69 310 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 FAM19A4Q96LR4 140 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 NDFIP1Q9BT67 221 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 TEKT3Q9BXF9 490 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 BLZF1Q9H2G9 400 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 SPNS1Q9H2V7 528 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 MED4Q9NPJ6 270 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 TMEM9BQ9NQ34 198 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 SAMSN1Q9NSI8 373 aaKnown RBP1.36□□□□□ -2.19
CHD9-211ENST00000564600 UVRAGQ9P2Y5 699 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 ZNF257Q9Y2Q1 563 aa1.36□□□□□ -2.19
CHD9-211ENST00000564600 SBNO1A3KN83 1393 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 KIF27Q86VH2 1401 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 A0A0J9YXV3 536 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 A0A1B0GUH1 482 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 TMEM120BA0PK00 339 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 TNFRSF11BO00300 401 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 KMOO15229 486 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 AKR7A2O43488 359 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 RAD1O60671 282 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 IGKV4-1P06312 121 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 UBCP0CG48 685 aaKnown RBP1.35□□□□□ -2.19
CHD9-211ENST00000564600 RAB5AP20339 215 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 MAS1LP35410 378 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 CEACAM6P40199 344 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 CSKP41240 450 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 NBL1P41271 181 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 P2RX1P51575 399 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 GFERP55789 205 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 CLDN6P56747 220 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 EIF3EP60228 445 aaKnown RBP1.35□□□□□ -2.19
CHD9-211ENST00000564600 UBE2NP61088 152 aaKnown RBP1.35□□□□□ -2.19
CHD9-211ENST00000564600 PPP1CBP62140 327 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 RPL18AQ02543 176 aaKnown RBP1.35□□□□□ -2.19
CHD9-211ENST00000564600 GINS1Q14691 196 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 TRMT5Q32P41 509 aaKnown RBP1.35□□□□□ -2.19
CHD9-211ENST00000564600 KRTAP6-3Q3LI67 103 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 ORMDL2Q53FV1 153 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 TPRG1LQ5T0D9 272 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 GPR107Q5VW38 600 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 ADNP2Q6IQ32 1131 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 RWDD4Q6NW29 188 aaKnown RBP1.35□□□□□ -2.19
CHD9-211ENST00000564600 ANGPTL8Q6UXH0 198 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 BRD3OSQ6XYD6 125 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 SHISA6Q6ZSJ9 500 aa1.35□□□□□ -2.19
CHD9-211ENST00000564600 SLC35D2Q76EJ3 337 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms