RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 CX3CR1P49238 355 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 ZNF83P51522 516 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 MLLT11Q13015 90 aaPredicted RBP14.7□□□□□ -0.06
CMTM3-208ENST00000564247 C3orf36Q3SXR2 165 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 ARMCX4Q5H9R4 360 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 SYT6Q5T7P8 510 aaPredicted RBP14.7□□□□□ -0.06
CMTM3-208ENST00000564247 XAF1Q6GPH4 301 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 RPL22L1Q6P5R6 122 aaKnown RBP14.7□□□□□ -0.06
CMTM3-208ENST00000564247 DRAM2Q6UX65 266 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 WFDC8Q8IUA0 241 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 ZNF799Q96GE5 643 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 ZC3HAV1LQ96H79 300 aaKnown RBP14.7□□□□□ -0.06
CMTM3-208ENST00000564247 ZNF75AQ96N20 296 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 DACH2Q96NX9 599 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 WFIKKN1Q96NZ8 548 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 HEATR1Q9H583 2144 aaKnown RBP14.7□□□□□ -0.06
CMTM3-208ENST00000564247 CDH20Q9HBT6 801 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 CRNNQ9UBG3 495 aaPredicted RBP14.7□□□□□ -0.06
CMTM3-208ENST00000564247 EIF3KQ9UBQ5 218 aaKnown RBP14.7□□□□□ -0.06
CMTM3-208ENST00000564247 GRIP1Q9Y3R0 1128 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 TRBV2A0A0J9YWF9 115 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 LOC110117498-PIK3R3F6TDL0 507 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 M0R1B8 84 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 GOSR1O95249 250 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 ANXA2P07355 339 aaKnown RBP14.69□□□□□ -0.06
CMTM3-208ENST00000564247 CRYGSP22914 178 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 CCKARP32238 428 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 RPL5P46777 297 aaKnown RBP14.69□□□□□ -0.06
CMTM3-208ENST00000564247 MMP16P51512 607 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 PSMA6P60900 246 aaKnown RBP14.69□□□□□ -0.06
CMTM3-208ENST00000564247 RSPO1Q2MKA7 263 aaPredicted RBP14.69□□□□□ -0.06
CMTM3-208ENST00000564247 FDX2Q6P4F2 183 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 CDH24Q86UP0 819 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 LURAP1LQ8IV03 231 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 ZNF584Q8IVC4 421 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 SLC7A6Q92536 515 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 UFD1Q92890 307 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 MUL1Q969V5 352 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 MS4A3Q96HJ5 214 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 POM121L2Q96KW2 1035 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 DOK1Q99704 481 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 MOB1AQ9H8S9 216 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 BRD7Q9NPI1 651 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 N6AMT1Q9Y5N5 214 aa14.69□□□□□ -0.06
CMTM3-208ENST00000564247 CELSR1Q9NYQ6 3014 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 ABCA4P78363 2273 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 LOC100509620A0A075B734 347 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 E9PI62 339 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 CASKO14936 926 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 OGG1O15527 345 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 IGLV1-44P01699 117 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 LCATP04180 440 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 TFAP2AP05549 437 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 DBHP09172 617 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 ACSM4P0C7M7 580 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 OTX1P32242 354 aaPredicted RBP14.68□□□□□ -0.06
CMTM3-208ENST00000564247 RGS6P49758 472 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 GTF2A1P52655 376 aaPredicted RBP14.68□□□□□ -0.06
CMTM3-208ENST00000564247 GPR50Q13585 617 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 ALKBH1Q13686 389 aaKnown RBP14.68□□□□□ -0.06
CMTM3-208ENST00000564247 KRTAP27-1Q3LI81 207 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 BCL2L15Q5TBC7 163 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 UNQ6126/PRO20091Q6UXV3 157 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 OR2G2Q8NGZ5 317 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 PGAM5Q96HS1 289 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 KCNS3Q9BQ31 491 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 CLEC4MQ9H2X3 399 aaPredicted RBP14.68□□□□□ -0.06
CMTM3-208ENST00000564247 OR52A1Q9UKL2 312 aa14.68□□□□□ -0.06
CMTM3-208ENST00000564247 PRR14LQ5THK1 2151 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 IGHV1-18A0A0C4DH31 117 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 PNPP00491 289 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 LALBAP00709 142 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 CCL2P13500 99 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 CELP19835 753 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 CCR9P51686 369 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 ZNF121P58317 390 aaPredicted RBP14.67□□□□□ -0.06
CMTM3-208ENST00000564247 TPBGQ13641 420 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 TSTQ16762 297 aaKnown RBP14.67□□□□□ -0.06
CMTM3-208ENST00000564247 TMEM108Q6UXF1 575 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 FAM57BQ71RH2 274 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 CATSPERDQ86XM0 798 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 OR52H1Q8NGJ2 320 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 C4orf45Q96LM5 186 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 OPALINQ96PE5 141 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 PBOV1Q9GZY1 135 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 COMMD4Q9H0A8 199 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 FAM206AQ9NX38 181 aa14.67□□□□□ -0.06
CMTM3-208ENST00000564247 AKAP6Q13023 2319 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 TBX1O43435 398 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 SRSF10O75494 262 aaKnown RBP14.66□□□□□ -0.06
CMTM3-208ENST00000564247 CRYAAP02489 173 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 THBDP07204 575 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 CELA3BP08861 270 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 CECR9P0C854 216 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 CPEP16870 476 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 PTAFRP25105 342 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 TTKP33981 857 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 ALDH3B2P48448 385 aa14.66□□□□□ -0.06
CMTM3-208ENST00000564247 GP2P55259 537 aaKnown RBP14.66□□□□□ -0.06
CMTM3-208ENST00000564247 SLC3A1Q07837 685 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms