RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 RAB3BP20337 219 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 ACHEP22303 614 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 CD40LGP29965 261 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 CHRNB4P30926 498 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 CDAP32320 146 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 RANBP1P43487 201 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 WDR38Q5JTN6 314 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 C1orf185Q5T7R7 199 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 BCL2L15Q5TBC7 163 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 OR2A2Q6IF42 318 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 UNQ9370/PRO34162Q6UXP9 181 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 DPPA2Q7Z7J5 298 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 DMRTC2Q8IXT2 367 aaPredicted RBP8.54□□□□□ -1.04
UBFD1-203ENST00000564106 TSEN15Q8WW01 171 aaKnown RBP8.54□□□□□ -1.04
UBFD1-203ENST00000564106 HSD17B8Q92506 261 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 RND1Q92730 232 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 NABP1Q96AH0 204 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 APH1AQ96BI3 265 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 C14orf79Q96F83 325 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 MAP6Q96JE9 813 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 WDFY2Q96P53 400 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 ALKBH3Q96Q83 286 aaPredicted RBP8.54□□□□□ -1.04
UBFD1-203ENST00000564106 OR14A2Q96R54 314 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 FOXB1Q99853 325 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 ATF6BQ99941 703 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 SP140LQ9H930 580 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 TCF7L1Q9HCS4 588 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 EMC7Q9NPA0 242 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 AKIP1Q9NQ31 210 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 DDX28Q9NUL7 540 aaKnown RBP8.54□□□□□ -1.04
UBFD1-203ENST00000564106 TMEM38BQ9NVV0 291 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 CKLFQ9UBR5 152 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 ATPIF1Q9UII2 106 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 HHLA2Q9UM44 414 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 PMF1-BGLAPU3KQ54 211 aa8.54□□□□□ -1.04
UBFD1-203ENST00000564106 MED12LQ86YW9 2145 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 AHRRA9YTQ3 701 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 SRSF10O75494 262 aaKnown RBP8.53□□□□□ -1.04
UBFD1-203ENST00000564106 CTSSP25774 331 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 SSTR2P30874 369 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 ETV6P41212 452 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 BMXP51813 675 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 RPS11P62280 158 aaKnown RBP eCLIP8.53□□□□□ -1.04
UBFD1-203ENST00000564106 PPP3R1P63098 170 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 HIST1H3AP68431 136 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 RAB35Q15286 201 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 CEACAM16Q2WEN9 425 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 ACSF3Q4G176 576 aaPredicted RBP8.53□□□□□ -1.04
UBFD1-203ENST00000564106 PHYHD1Q5SRE7 291 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 HIST2H3PS2Q5TEC6 136 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 CORO6Q6QEF8 472 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 CFAP77Q6ZQR2 320 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 HIST2H3AQ71DI3 136 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 ADGRE4PQ86SQ3 457 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 CDH24Q86UP0 819 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 TUSC5Q8IXB3 177 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 ZNF100Q8IYN0 542 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 PIAS4Q8N2W9 510 aaPredicted RBP8.53□□□□□ -1.04
UBFD1-203ENST00000564106 PRSS35Q8N3Z0 413 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 CCDC54Q8NEL0 328 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 SPTSSAQ969W0 71 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 DERL3Q96Q80 235 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 DCLRE1CQ96SD1 692 aaKnown RBP8.53□□□□□ -1.04
UBFD1-203ENST00000564106 KCNJ15Q99712 375 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 ZNF416Q9BWM5 594 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 BARHL1Q9BZE3 327 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 GPR35Q9HC97 309 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 COQ3Q9NZJ6 369 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 CLCF1Q9UBD9 225 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 UPB1Q9UBR1 384 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 NUFIP1Q9UHK0 495 aaKnown RBP8.53□□□□□ -1.04
UBFD1-203ENST00000564106 OR52A1Q9UKL2 312 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 DHDHQ9UQ10 334 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 EMC9Q9Y3B6 208 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 CMAHPQ9Y471 501 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 ALPK2Q86TB3 2170 aa8.53□□□□□ -1.04
UBFD1-203ENST00000564106 ABCA4P78363 2273 aa8.52□□□□□ -1.04
UBFD1-203ENST00000564106 NOTOA8MTQ0 251 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 SS18L1O75177 396 aaPredicted RBP8.52□□□□□ -1.05
UBFD1-203ENST00000564106 CNOT4O95628 575 aaKnown RBP8.52□□□□□ -1.05
UBFD1-203ENST00000564106 HOXD4P09016 255 aaPredicted RBP8.52□□□□□ -1.05
UBFD1-203ENST00000564106 GABRA1P14867 456 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 SRMP19623 302 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 FSTP19883 344 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 AGTR1P30556 359 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 KIR3DL2P43630 455 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 ENDOGQ14249 297 aaKnown RBP8.52□□□□□ -1.05
UBFD1-203ENST00000564106 SLC36A2Q495M3 483 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 ELFN2Q5R3F8 820 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 TSPO2Q5TGU0 170 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 SFXN4Q6P4A7 337 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 C16orf87Q6PH81 154 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 SPATC1Q76KD6 591 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 ZNF627Q7L945 461 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 LUZP2Q86TE4 346 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 ELMOD2Q8IZ81 293 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 SLC22A24Q8N4F4 322 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 IL17RDQ8NFM7 739 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 WNT2BQ93097 391 aa8.52□□□□□ -1.05
UBFD1-203ENST00000564106 TMEM106AQ96A25 262 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms