RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 TNFRSF1AP19438 455 aa26.02■■□□□ 1.76
CMTM4-204ENST00000563952 HNF1AP20823 631 aa26.02■■□□□ 1.76
CMTM4-204ENST00000563952 PCK2Q16822 640 aa26.02■■□□□ 1.76
CMTM4-204ENST00000563952 SPATC1Q76KD6 591 aa26.02■■□□□ 1.76
CMTM4-204ENST00000563952 ZNF771Q7L3S4 317 aaPredicted RBP26.02■■□□□ 1.76
CMTM4-204ENST00000563952 ERI1Q8IV48 349 aaKnown RBP26.02■■□□□ 1.76
CMTM4-204ENST00000563952 OR10AD1Q8NGE0 317 aa26.02■■□□□ 1.76
CMTM4-204ENST00000563952 UTP4Q969X6 686 aaKnown RBP26.02■■□□□ 1.76
CMTM4-204ENST00000563952 ZNF665Q9H7R5 613 aa26.02■■□□□ 1.76
CMTM4-204ENST00000563952 ISPDA4D126 451 aa26.01■■□□□ 1.75
CMTM4-204ENST00000563952 PRR23D1E9PI22 279 aaPredicted RBP26.01■■□□□ 1.75
CMTM4-204ENST00000563952 SURF4O15260 269 aa26.01■■□□□ 1.75
CMTM4-204ENST00000563952 IFNA2P01563 188 aa26.01■■□□□ 1.75
CMTM4-204ENST00000563952 HMGN1P05114 100 aa26.01■■□□□ 1.75
CMTM4-204ENST00000563952 PRR23D2P0DMB1 279 aaPredicted RBP26.01■■□□□ 1.75
CMTM4-204ENST00000563952 GSTT1P30711 240 aa26.01■■□□□ 1.75
CMTM4-204ENST00000563952 RBMXP38159 391 aaKnown RBP26.01■■□□□ 1.75
CMTM4-204ENST00000563952 EIF2B1Q14232 305 aaKnown RBP26.01■■□□□ 1.75
CMTM4-204ENST00000563952 GK2Q14410 553 aaPredicted RBP26.01■■□□□ 1.75
CMTM4-204ENST00000563952 TEX30Q5JUR7 227 aa26.01■■□□□ 1.75
CMTM4-204ENST00000563952 PLBD1Q6P4A8 553 aa26.01■■□□□ 1.75
CMTM4-204ENST00000563952 PEG10Q86TG7 708 aaKnown RBP26.01■■□□□ 1.75
CMTM4-204ENST00000563952 OR6N2Q8NGY6 317 aa26.01■■□□□ 1.75
CMTM4-204ENST00000563952 OR13G1Q8NGZ3 307 aa26.01■■□□□ 1.75
CMTM4-204ENST00000563952 NRBF2Q96F24 287 aa26.01■■□□□ 1.75
CMTM4-204ENST00000563952 OR2V2Q96R30 315 aa26.01■■□□□ 1.75
CMTM4-204ENST00000563952 INTS14Q96SY0 518 aa26.01■■□□□ 1.75
CMTM4-204ENST00000563952 DCAF16Q9NXF7 216 aa26.01■■□□□ 1.75
CMTM4-204ENST00000563952 IL19Q9UHD0 177 aa26.01■■□□□ 1.75
CMTM4-204ENST00000563952 DYSFO75923 2080 aa26■■□□□ 1.75
CMTM4-204ENST00000563952 IQCF6A8MYZ5 107 aa26■■□□□ 1.75
CMTM4-204ENST00000563952 GLCEO94923 617 aa26■■□□□ 1.75
CMTM4-204ENST00000563952 SELEP16581 610 aa26■■□□□ 1.75
CMTM4-204ENST00000563952 PRKXP51817 358 aa26■■□□□ 1.75
CMTM4-204ENST00000563952 DVL1P1P54792 670 aaPredicted RBP26■■□□□ 1.75
CMTM4-204ENST00000563952 CDK5Q00535 292 aa26■■□□□ 1.75
CMTM4-204ENST00000563952 TMEM236Q5W0B7 351 aa26■■□□□ 1.75
CMTM4-204ENST00000563952 GLCCI1Q86VQ1 547 aa26■■□□□ 1.75
CMTM4-204ENST00000563952 ST7LQ8TDW4 575 aa26■■□□□ 1.75
CMTM4-204ENST00000563952 PLEKHA8Q96JA3 519 aa26■■□□□ 1.75
CMTM4-204ENST00000563952 PAPOLBQ9NRJ5 636 aaKnown RBP26■■□□□ 1.75
CMTM4-204ENST00000563952 N6AMT1Q9Y5N5 214 aa26■■□□□ 1.75
CMTM4-204ENST00000563952 H0YL77 283 aa25.99■■□□□ 1.75
CMTM4-204ENST00000563952 SRD5A1P18405 259 aa25.99■■□□□ 1.75
CMTM4-204ENST00000563952 SNAI3Q3KNW1 292 aa25.99■■□□□ 1.75
CMTM4-204ENST00000563952 DRAM2Q6UX65 266 aa25.99■■□□□ 1.75
CMTM4-204ENST00000563952 PGAP1Q75T13 922 aa25.99■■□□□ 1.75
CMTM4-204ENST00000563952 MRPL21Q7Z2W9 205 aaKnown RBP25.99■■□□□ 1.75
CMTM4-204ENST00000563952 DPY19L4Q7Z388 723 aa25.99■■□□□ 1.75
CMTM4-204ENST00000563952 ZNF283Q8N7M2 679 aa25.99■■□□□ 1.75
CMTM4-204ENST00000563952 OR5K1Q8NHB7 308 aa25.99■■□□□ 1.75
CMTM4-204ENST00000563952 ZMYND19Q96E35 227 aaPredicted RBP25.99■■□□□ 1.75
CMTM4-204ENST00000563952 GAL3ST1Q99999 423 aa25.99■■□□□ 1.75
CMTM4-204ENST00000563952 TEX12Q9BXU0 123 aa25.99■■□□□ 1.75
CMTM4-204ENST00000563952 TMEM106BQ9NUM4 274 aa25.99■■□□□ 1.75
CMTM4-204ENST00000563952 TMEFF2Q9UIK5 374 aaPredicted RBP25.99■■□□□ 1.75
CMTM4-204ENST00000563952 ZNF878C9JN71 531 aa25.98■■□□□ 1.75
CMTM4-204ENST00000563952 MSMBP08118 114 aa25.98■■□□□ 1.75
CMTM4-204ENST00000563952 OTX1P32242 354 aaPredicted RBP25.98■■□□□ 1.75
CMTM4-204ENST00000563952 ATP6AP1Q15904 470 aa25.98■■□□□ 1.75
CMTM4-204ENST00000563952 KLHL12Q53G59 568 aa25.98■■□□□ 1.75
CMTM4-204ENST00000563952 CPOQ8IVL8 374 aa25.98■■□□□ 1.75
CMTM4-204ENST00000563952 DNAJC9Q8WXX5 260 aa25.98■■□□□ 1.75
CMTM4-204ENST00000563952 RAB39BQ96DA2 213 aa25.98■■□□□ 1.75
CMTM4-204ENST00000563952 KCNJ15Q99712 375 aa25.98■■□□□ 1.75
CMTM4-204ENST00000563952 SLC30A2Q9BRI3 323 aa25.98■■□□□ 1.75
CMTM4-204ENST00000563952 TMEM100Q9NV29 134 aa25.98■■□□□ 1.75
CMTM4-204ENST00000563952 PPP1R3CQ9UQK1 317 aa25.98■■□□□ 1.75
CMTM4-204ENST00000563952 AP4S1Q9Y587 144 aa25.98■■□□□ 1.75
CMTM4-204ENST00000563952 SLC2A1P11166 492 aa25.97■■□□□ 1.75
CMTM4-204ENST00000563952 ANOS1P23352 680 aa25.97■■□□□ 1.75
CMTM4-204ENST00000563952 DAPP51397 102 aa25.97■■□□□ 1.75
CMTM4-204ENST00000563952 FAHD1Q6P587 224 aa25.97■■□□□ 1.75
CMTM4-204ENST00000563952 OR51F2Q8NH61 342 aa25.97■■□□□ 1.75
CMTM4-204ENST00000563952 OR2AE1Q8NHA4 323 aa25.97■■□□□ 1.75
CMTM4-204ENST00000563952 TMEM186Q96B77 213 aa25.97■■□□□ 1.75
CMTM4-204ENST00000563952 SLC25A19Q9HC21 320 aa25.97■■□□□ 1.75
CMTM4-204ENST00000563952 HIF1ANQ9NWT6 349 aa25.97■■□□□ 1.75
CMTM4-204ENST00000563952 NPTNQ9Y639 398 aa25.97■■□□□ 1.75
CMTM4-204ENST00000563952 C5orf63A6NC05 138 aa25.96■■□□□ 1.75
CMTM4-204ENST00000563952 MLNRO43193 412 aa25.96■■□□□ 1.75
CMTM4-204ENST00000563952 CIB2O75838 187 aa25.96■■□□□ 1.75
CMTM4-204ENST00000563952 IGHV2-5P01817 119 aa25.96■■□□□ 1.75
CMTM4-204ENST00000563952 SPRYD4Q8WW59 207 aaPredicted RBP25.96■■□□□ 1.75
CMTM4-204ENST00000563952 MEGF10Q96KG7 1140 aa25.96■■□□□ 1.75
CMTM4-204ENST00000563952 ABHD6Q9BV23 337 aa25.96■■□□□ 1.75
CMTM4-204ENST00000563952 MARCH7Q9H992 704 aa25.96■■□□□ 1.75
CMTM4-204ENST00000563952 UBAP1Q9NZ09 502 aa25.96■■□□□ 1.75
CMTM4-204ENST00000563952 IGHV3-64DA0A0J9YX35 117 aa25.95■■□□□ 1.74
CMTM4-204ENST00000563952 F5H5P2 479 aa25.95■■□□□ 1.74
CMTM4-204ENST00000563952 HLA-DPB1P04440 258 aa25.95■■□□□ 1.74
CMTM4-204ENST00000563952 SBK2P0C263 348 aa25.95■■□□□ 1.74
CMTM4-204ENST00000563952 FASP25445 335 aa25.95■■□□□ 1.74
CMTM4-204ENST00000563952 SLC15A1P46059 708 aa25.95■■□□□ 1.74
CMTM4-204ENST00000563952 SRP9P49458 86 aaKnown RBP25.95■■□□□ 1.74
CMTM4-204ENST00000563952 CRISP1P54107 249 aa25.95■■□□□ 1.74
CMTM4-204ENST00000563952 RPS7P62081 194 aaKnown RBP25.95■■□□□ 1.74
CMTM4-204ENST00000563952 GRB2P62993 217 aaKnown RBP25.95■■□□□ 1.74
CMTM4-204ENST00000563952 ZNF92Q03936 586 aa25.95■■□□□ 1.74
CMTM4-204ENST00000563952 GLYATL3Q5SZD4 288 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms