RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 KRT72Q14CN4 511 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 OR8G1Q15617 311 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 PTCHD4Q6ZW05 846 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 PGAP1Q75T13 922 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 TMEM86BQ8N661 226 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 BOLLQ8N9W6 283 aaKnown RBP17.4■□□□□ 0.38
HERC2-204ENST00000563945 C19orf18Q8NEA5 215 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 TBC1D15Q8TC07 691 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 DACT3Q96B18 629 aaPredicted RBP17.4■□□□□ 0.38
HERC2-204ENST00000563945 SLCO4A1Q96BD0 722 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 TSSK2Q96PF2 358 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 ERMAPQ96PL5 475 aaPredicted RBP17.4■□□□□ 0.38
HERC2-204ENST00000563945 HOPXQ9BPY8 73 aaPredicted RBP17.4■□□□□ 0.38
HERC2-204ENST00000563945 SLC22A4Q9H015 551 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 FN3KRPQ9HA64 309 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 FGFR1OP2Q9NVK5 253 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 RNF7Q9UBF6 113 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 TMCC3Q9ULS5 477 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 LHFPL6Q9Y693 200 aa17.4■□□□□ 0.38
HERC2-204ENST00000563945 A0A1W2PRQ8 180 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 NDUFAB1O14561 156 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 TIMM23O14925 209 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 FAM20BO75063 409 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 TOX4O94842 621 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 TXNDC12O95881 172 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 HLA-DQA2P01906 255 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 MDH1P40925 334 aaKnown RBP17.39■□□□□ 0.37
HERC2-204ENST00000563945 HIST1H3AP68431 136 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 DGCR6Q14129 220 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 GK2Q14410 553 aaPredicted RBP17.39■□□□□ 0.37
HERC2-204ENST00000563945 OCLNQ16625 522 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 HIST2H3PS2Q5TEC6 136 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 ZNF620Q6ZNG0 422 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 HIST2H3AQ71DI3 136 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 MRPL21Q7Z2W9 205 aaKnown RBP17.39■□□□□ 0.37
HERC2-204ENST00000563945 RP9Q8TA86 221 aaKnown RBP17.39■□□□□ 0.37
HERC2-204ENST00000563945 Q8TCH9 128 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 WFDC12Q8WWY7 111 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 GATAD2BQ8WXI9 593 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 TRIM36Q9NQ86 728 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 GMPR2Q9P2T1 348 aaKnown RBP17.39■□□□□ 0.37
HERC2-204ENST00000563945 B9D1Q9UPM9 204 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 POMT1Q9Y6A1 747 aa17.39■□□□□ 0.37
HERC2-204ENST00000563945 CLPSL1A2RUU4 121 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 ZNF879B4DU55 563 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 SLC22A2O15244 555 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 NDUFA7O95182 113 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 ACSM4P0C7M7 580 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 CD200P41217 278 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 SLC7A2P52569 658 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 TPTEP56180 551 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 SRSF4Q08170 494 aaKnown RBP17.38■□□□□ 0.37
HERC2-204ENST00000563945 COX10Q12887 443 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 MAB21L1Q13394 359 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 PDCD1Q15116 288 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 OR8B8Q15620 311 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 METTL11BQ5VVY1 283 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 PRAMEF6Q5VXH4 476 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 RUSC1-AS1Q66K80 236 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 SMARCD3Q6STE5 483 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 COLCA1Q6ZS62 124 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 PNLDC1Q8NA58 520 aaKnown RBP17.38■□□□□ 0.37
HERC2-204ENST00000563945 SSMEM1Q8WWF3 244 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 UBE2FQ969M7 185 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 CHIAQ9BZP6 476 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 TRIM15Q9C019 465 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 VIPAS39Q9H9C1 493 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 ARGLU1Q9NWB6 273 aaPredicted RBP17.38■□□□□ 0.37
HERC2-204ENST00000563945 C1RLQ9NZP8 487 aa17.38■□□□□ 0.37
HERC2-204ENST00000563945 C22orf46C9J442 243 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 LGALS8O00214 317 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 NDUFA2O43678 99 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 GMNNO75496 209 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 PPP1R3DO95685 299 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 RHCEP18577 417 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 NOS3P29474 1203 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 CFHR2P36980 270 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 PSMB10P40306 273 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 OMPP47874 163 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 PRSS12P56730 875 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 ZNF841Q6ZN19 808 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 LINC00346Q8IVM7 164 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 ATF6BQ99941 703 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 NSRP1Q9H0G5 558 aaKnown RBP17.37■□□□□ 0.37
HERC2-204ENST00000563945 EFCAB1Q9HAE3 211 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 PDP1Q9P0J1 537 aaPredicted RBP17.37■□□□□ 0.37
HERC2-204ENST00000563945 ARMCX1Q9P291 453 aa17.37■□□□□ 0.37
HERC2-204ENST00000563945 A0A1B0GWJ7 208 aa17.36■□□□□ 0.37
HERC2-204ENST00000563945 DCTN6O00399 190 aa17.36■□□□□ 0.37
HERC2-204ENST00000563945 TNFRSF13BO14836 293 aaPredicted RBP17.36■□□□□ 0.37
HERC2-204ENST00000563945 ADAM20O43506 726 aa17.36■□□□□ 0.37
HERC2-204ENST00000563945 SFTPBP07988 381 aa17.36■□□□□ 0.37
HERC2-204ENST00000563945 MELTFP08582 738 aa17.36■□□□□ 0.37
HERC2-204ENST00000563945 CA6P23280 308 aa17.36■□□□□ 0.37
HERC2-204ENST00000563945 SLC6A6P31641 620 aa17.36■□□□□ 0.37
HERC2-204ENST00000563945 GGT2P36268 569 aa17.36■□□□□ 0.37
HERC2-204ENST00000563945 GSK3BP49841 420 aa17.36■□□□□ 0.37
HERC2-204ENST00000563945 TRAP1Q12931 704 aaKnown RBP17.36■□□□□ 0.37
HERC2-204ENST00000563945 RSPO1Q2MKA7 263 aaPredicted RBP17.36■□□□□ 0.37
HERC2-204ENST00000563945 SFRP4Q6FHJ7 346 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms