RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 B4GALT1P15291 398 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 HIST1H1CP16403 213 aaKnown RBP13.37□□□□□ -0.27
RNF40-205ENST00000563909 GIPRP48546 466 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 ZNF84P51523 738 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 CRISP1P54107 249 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 KLF3P57682 345 aaPredicted RBP13.37□□□□□ -0.27
RNF40-205ENST00000563909 RAB1AP62820 205 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 DEFB112Q30KQ8 113 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 C10orf128Q5T292 105 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 RGS7BPQ6MZT1 257 aaPredicted RBP13.37□□□□□ -0.27
RNF40-205ENST00000563909 ZBTB49Q6ZSB9 765 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 ZNF627Q7L945 461 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 OR4Q3Q8NH05 313 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 LINC01006Q8NI28 216 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 EME1Q96AY2 570 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 ELMOD3Q96FG2 381 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 CHIAQ9BZP6 476 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 ZNF224Q9NZL3 707 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 VSX1Q9NZR4 365 aaPredicted RBP13.37□□□□□ -0.27
RNF40-205ENST00000563909 ORC6Q9Y5N6 252 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 SLC22A23A1A5C7 686 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 EI24O14681 340 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 IFNGP01579 166 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 HMGN1P05114 100 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 CD80P33681 288 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 GRK5P34947 590 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 CDKN2AP42771 156 aaKnown RBP13.36□□□□□ -0.27
RNF40-205ENST00000563909 ALDH3A2P51648 485 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 CDK5Q00535 292 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.36□□□□□ -0.27
RNF40-205ENST00000563909 GINS1Q14691 196 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 SLC35F1Q5T1Q4 408 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 SLC25A47Q6Q0C1 308 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 CBR4Q8N4T8 237 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 OR4K13Q8NH42 304 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 SYNPRQ8TBG9 265 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 NMD3Q96D46 503 aaKnown RBP13.36□□□□□ -0.27
RNF40-205ENST00000563909 FOXB1Q99853 325 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 SLC25A19Q9HC21 320 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 SLCO1C1Q9NYB5 712 aa13.36□□□□□ -0.27
RNF40-205ENST00000563909 POLR3KQ9Y2Y1 108 aaPredicted RBP13.36□□□□□ -0.27
RNF40-205ENST00000563909 H7C1C5 153 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 MGRN1O60291 552 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 MITFO75030 526 aaPredicted RBP13.35□□□□□ -0.27
RNF40-205ENST00000563909 UBL3O95164 117 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 SLC2A10O95528 541 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 PLATP00750 562 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 ALPLP05186 524 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 FAM157BP0CG42 384 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 ZNF250P15622 560 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 CRABP1P29762 137 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 GUCA1AP43080 201 aaPredicted RBP13.35□□□□□ -0.27
RNF40-205ENST00000563909 RAD23AP54725 363 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 PROK1P58294 105 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 LCN6P62502 163 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 PAX8Q06710 450 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 FMODQ06828 376 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 RAB39AQ14964 217 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 NRN1LQ496H8 165 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 RUSC1-AS1Q66K80 236 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 C11orf87Q6NUJ2 197 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 DNM1P34Q6PK57 102 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 PTCHD4Q6ZW05 846 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 NSMAFQ92636 917 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 NMNAT3Q96T66 252 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 OR51B6Q9H340 312 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 C8orf4Q9NR00 106 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 FBXL3Q9UKT7 428 aa13.35□□□□□ -0.27
RNF40-205ENST00000563909 IGLV3-9A0A075B6K5 115 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 KHDRBS3O75525 346 aaKnown RBP13.34□□□□□ -0.27
RNF40-205ENST00000563909 FARS2O95363 451 aaKnown RBP13.34□□□□□ -0.27
RNF40-205ENST00000563909 MT-ND5P03915 603 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 SERPINA5P05154 406 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 SBK2P0C263 348 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 SLC6A9P48067 706 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 SEC61A1P61619 476 aaKnown RBP13.34□□□□□ -0.27
RNF40-205ENST00000563909 SLC3A1Q07837 685 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 PTGES3Q15185 160 aaKnown RBP13.34□□□□□ -0.27
RNF40-205ENST00000563909 ZNF584Q8IVC4 421 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 IQCF1Q8N6M8 205 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 NPEPL1Q8NDH3 523 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 SDR9C7Q8NEX9 313 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 GABARAPL3Q9BY60 117 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 PRRG3Q9BZD7 231 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 SYT4Q9H2B2 425 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 PRDM13Q9H4Q3 707 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 CMC2Q9NRP2 79 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 TMEM38BQ9NVV0 291 aa13.34□□□□□ -0.27
RNF40-205ENST00000563909 IGKV1D-43A0A0B4J1Z2 117 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 TRAV40A0A0B4J280 105 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 RIIAD1A6NNX1 92 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 SLC16A7O60669 478 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 OPN1MWP04001 364 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 LCKP06239 509 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 PATE4P0C8F1 98 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 OR8G3PP0DMU2 310 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 OPN1MW2P0DN77 364 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 OPN1MW3P0DN78 364 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 ZNF3P17036 446 aa13.33□□□□□ -0.28
RNF40-205ENST00000563909 GLO1Q04760 184 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 235.8 ms