RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ANKRD46Q86W74 232 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 CNPY4Q8N129 248 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 C4orf33Q8N1A6 199 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 VPS37AQ8NEZ2 397 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 ERGIC1Q969X5 290 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 AKR1E2Q96JD6 320 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 TRNT1Q96Q11 434 aaKnown RBP8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 RLIMQ9NVW2 624 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 CDHR4A6H8M9 788 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 CFAP73A6NFT4 308 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 F5H5P2 479 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 CHEK2O96017 543 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 TFPTP0C1Z6 253 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 PGA5P0DJD9 388 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 PRG2P13727 222 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 KRT4P19013 534 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 CDX1P47902 265 aaPredicted RBP8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 ARHGDIAP52565 204 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 EMX2Q04743 252 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 SEC23BQ15437 767 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 PGS1Q32NB8 556 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 SLC16A14Q7RTX9 510 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 MIER2Q8N344 545 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 FNDC5Q8NAU1 212 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 OR6N1Q8NGY5 312 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 OR13G1Q8NGZ3 307 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 AGR3Q8TD06 166 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 CHPT1Q8WUD6 406 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 TESCQ96BS2 214 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 FOXRED1Q96CU9 486 aaPredicted RBP8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 EMC6Q9BV81 110 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 ELOVL3Q9HB03 270 aa8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 PRPF19Q9UMS4 504 aaKnown RBP8.18□□□□□ -1.1
HDGFL3-204ENST00000563790 A0A0J9YWU9 116 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 PRSS51A0A1B0GVH4 220 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 OOEPA6NGQ2 149 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 FAM90A22PA8MWA6 464 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 H3BUI4 141 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 COPEO14579 308 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 MLNRO43193 412 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 AGR2O95994 175 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 AMY1AP04745 511 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 AMY2AP04746 511 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 GKN3PP0CG01 181 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 TUBG1P23258 451 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 GSK3BP49841 420 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 GDI2P50395 445 aaKnown RBP8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 TNFRSF9Q07011 255 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 BLMHQ13867 455 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 OR8B8Q15620 311 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 GSTA3Q16772 222 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 LGALS9BQ3B8N2 356 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 INTS11Q5TA45 600 aaKnown RBP8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 C1orf140Q5VVS0 124 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 BAIAP2L2Q6UXY1 529 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 LRRC74BQ6ZQY2 392 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 FAM90A1Q86YD7 464 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 DRAM1Q8N682 238 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 OR4K5Q8NGD3 323 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 OR4A15Q8NGL6 344 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 MFSD8Q8NHS3 518 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 EPS8L3Q8TE67 593 aaKnown RBP8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 HAVCR1Q96D42 359 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 TEX37Q96LM6 180 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 CCDC115Q96NT0 180 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 TMED9Q9BVK6 235 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 EGLN3Q9H6Z9 239 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 LIN7BQ9HAP6 207 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 TUBG2Q9NRH3 451 aa8.17□□□□□ -1.1
HDGFL3-204ENST00000563790 A8MVM7 634 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 OR8U8P0C7N1 319 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 DUX4L4P0CJ87 422 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 NCF2P19878 526 aaPredicted RBP8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 CBLP22681 906 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 CXCR1P25024 350 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 CDKN2CP42773 168 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 POU4F2Q12837 409 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 TAF11Q15544 211 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 SPANXN4Q5MJ08 99 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 ATAD3BQ5T9A4 648 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 ZNF836Q6ZNA1 936 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 CLIP4Q8N3C7 705 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 CCDC63Q8NA47 563 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 CMBLQ96DG6 245 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 SLC35A5Q9BS91 424 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 MTHFD2LQ9H903 347 aaPredicted RBP8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 RNF7Q9UBF6 113 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 PRDM4Q9UKN5 801 aa8.16□□□□□ -1.1
HDGFL3-204ENST00000563790 IGKV1D-42A0A075B6H8 117 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 HTR3EA5X5Y0 456 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 M0R2N4 97 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 OVOL1O14753 267 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 HPRP00739 348 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 IL12AP29459 219 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 KIR3DL2P43630 455 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 ERFP50548 548 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 GUCY1A3Q02108 690 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 GPAT3Q53EU6 434 aa8.15□□□□□ -1.1
HDGFL3-204ENST00000563790 HHATQ5VTY9 493 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms