RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 SPOPO43791 374 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 CDC40O60508 579 aaKnown RBP eCLIP2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 NEMFO60524 1076 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 AQP8O94778 261 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 PAHP00439 452 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 KLK1P06870 262 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 CD3GP09693 182 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 ZDHHC11BP0C7U3 371 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 SMIM10L1P0DMW3 83 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 HOXB8P17481 243 aaPredicted RBP2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 CD9P21926 228 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 WARSP23381 471 aaKnown RBP2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 LCN1P31025 176 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 HOXA9P31269 272 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 GGT2P36268 569 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 HCAR3P49019 387 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 P2RX1P51575 399 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 HADHBP55084 474 aaKnown RBP2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 VSX2P58304 361 aaPredicted RBP2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 UBE2NP61088 152 aaKnown RBP2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 YWHAEP62258 255 aaKnown RBP2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 SARNPP82979 210 aaKnown RBP2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 CYP24A1Q07973 514 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 SIGLEC14Q08ET2 396 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 MADCAM1Q13477 382 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 TFDP2Q14188 446 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 TPRG1LQ5T0D9 272 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 CYB5R2Q6BCY4 276 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 LYPD2Q6UXB3 125 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 H2AFVQ71UI9 128 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 C6orf120Q7Z4R8 191 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 NKAIN4Q8IVV8 208 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 FAM58AQ8N1B3 248 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF433Q8N7K0 673 aaPredicted RBP2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 LINC01555Q8NAE3 123 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 OR11H7Q8NGC8 314 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 OR6Q1Q8NGQ2 317 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 OR13C9Q8NGT0 318 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 ITFG1Q8TB96 612 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 ZFP90Q8TF47 636 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 FAM131CQ96AQ9 280 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 TM4SF18Q96CE8 201 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 RBMXL1Q96E39 390 aaKnown RBP2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 SMIM10Q96HG1 83 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 WFIKKN1Q96NZ8 548 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 CALN1Q9BXU9 219 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 MYOZ1Q9NP98 299 aaPredicted RBP2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF229Q9UJW7 825 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 KCNE3Q9Y6H6 103 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 TSPOAP1O95153 1857 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 PCDH11XQ9BZA7 1347 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 BRCA1P38398 1863 aaKnown RBP2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 WDR62O43379 1518 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 A0A0J9YYE9 177 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 LOC100506127A0A0U1RQW1 187 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 A0A1B0GUA9 196 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 PINLYPA6NC86 204 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 TRIM49D1C9J1S8 452 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 ANKRD63C9JTQ0 380 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 ANKRD65E5RJM6 399 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 H3BN98 237 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 M0QX08 132 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 RFXANKO14593 260 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 POLR3GO15318 223 aaPredicted RBP2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 GMDSO60547 372 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 SLC16A7O60669 478 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 FOXH1O75593 365 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 PLEKHA8P1O95397 391 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 HPRT1P00492 218 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 TRBC1P01850 177 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 BCHEP06276 602 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 OR8U9P0C7N5 309 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 ATF6P18850 670 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 FABP6P51161 128 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 CCNG1P51959 295 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 RAP1AP62834 184 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 ERCC8Q13216 396 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 GPR176Q14439 515 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 Q3ZCU0 254 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 CCDC122Q5T0U0 273 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 THEM4Q5T1C6 240 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 OR2T5Q6IEZ7 315 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 NPSR1Q6W5P4 371 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 LINC00336Q6ZUF6 198 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 Q6ZVH6 145 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 RAB43Q86YS6 212 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 SLC34A3Q8N130 599 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 NPWQ8N729 165 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 COX18Q8N8Q8 333 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 OR2T29Q8NH02 315 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 OR8U1Q8NH10 309 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 RNF138Q8WVD3 245 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 OR8D1Q8WZ84 308 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 NTAN1Q96AB6 310 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF799Q96GE5 643 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 STMN4Q9H169 189 aaPredicted RBP2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 ANKHQ9HCJ1 492 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 SLC40A1Q9NP59 571 aa2.14□□□□□ -2.07
SHCBP1-202ENST00000563219 RGS18Q9NS28 235 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms