RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SLC25A40Q8TBP6 338 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 PGAM5Q96HS1 289 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 MOB1AQ9H8S9 216 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 BRD7Q9NPI1 651 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 EDARQ9UNE0 448 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 GTF2A1LQ9UNN4 478 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 BAHCC1Q9P281 2608 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 TMEM269A0A1B0GVZ9 245 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 PTGES3LE9PB15 166 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 MAGEB4O15481 346 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-207ENST00000563109 SERPINF1P36955 418 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 ERVS71-1P61550 626 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 ADIPOQQ15848 244 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 AGAP6Q5VW22 663 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 TMPRSS11AQ6ZMR5 421 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 FAM57BQ71RH2 274 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 NAA40Q86UY6 237 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 MUC15Q8N387 334 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 KLHL36Q8N4N3 616 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 SYNPRQ8TBG9 265 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 MRPL24Q96A35 216 aaKnown RBP16.19■□□□□ 0.18
RAB40C-207ENST00000563109 OR2J1Q9GZK6 312 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 OR10A2Q9H208 303 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 PLK3Q9H4B4 646 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 FKBP14Q9NWM8 211 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 PTTG3PQ9NZH4 202 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 STARD10Q9Y365 291 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 R4GMQ9 66 aa16.19■□□□□ 0.18
RAB40C-207ENST00000563109 ACOD1A6NK06 481 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 LOC110117498-PIK3R3F6TDL0 507 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 J3QLW9 94 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 XRCC2O43543 280 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 RPP14O95059 124 aaKnown RBP16.18■□□□□ 0.18
RAB40C-207ENST00000563109 ATE1O95260 518 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 ZNF19P17023 458 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 TTKP33981 857 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 KLF3P57682 345 aaPredicted RBP16.18■□□□□ 0.18
RAB40C-207ENST00000563109 TIGD6Q17RP2 521 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 SNAI3Q3KNW1 292 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 ZNF684Q5T5D7 378 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 EGFL6Q8IUX8 553 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 SYS1Q8N2H4 156 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 C4orf36Q96KX1 117 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 OPA3Q9H6K4 179 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 ACOXLQ9NUZ1 547 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 UBAP1Q9NZ09 502 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 DUSP13Q9UII6 198 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 FZR1Q9UM11 496 aa16.18■□□□□ 0.18
RAB40C-207ENST00000563109 A0A1W2PPW3 197 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 B9A039 149 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 MYL12BO14950 172 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 CDK1P06493 297 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 LIMS3P0CW19 117 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 LIMS4P0CW20 117 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 ZNF250P15622 560 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 CRHBPP24387 322 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 ETV1P50549 477 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 MMP16P51512 607 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 OR12D2P58182 307 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 SNRPD2P62316 118 aaKnown RBP16.17■□□□□ 0.18
RAB40C-207ENST00000563109 MRPL28Q13084 256 aaKnown RBP16.17■□□□□ 0.18
RAB40C-207ENST00000563109 EFNB3Q15768 340 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 BCL2L15Q5TBC7 163 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 LIPNQ5VXI9 398 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 MBNL2Q5VZF2 373 aaKnown RBP16.17■□□□□ 0.18
RAB40C-207ENST00000563109 PAMR1Q6UXH9 720 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 MRPL21Q7Z2W9 205 aaKnown RBP16.17■□□□□ 0.18
RAB40C-207ENST00000563109 KLF14Q8TD94 323 aaPredicted RBP16.17■□□□□ 0.18
RAB40C-207ENST00000563109 HAVCR2Q8TDQ0 301 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 MARS2Q96GW9 593 aaKnown RBP16.17■□□□□ 0.18
RAB40C-207ENST00000563109 CCL19Q99731 98 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 SYT3Q9BQG1 590 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 MRPL37Q9BZE1 423 aaKnown RBP16.17■□□□□ 0.18
RAB40C-207ENST00000563109 POFUT1Q9H488 388 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 CBLN4Q9NTU7 201 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 FAM206AQ9NX38 181 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 GPR160Q9UJ42 338 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 CAB39Q9Y376 341 aaPredicted RBP16.17■□□□□ 0.18
RAB40C-207ENST00000563109 PCDHGB5Q9Y5G0 923 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 SNX5Q9Y5X3 404 aa16.17■□□□□ 0.18
RAB40C-207ENST00000563109 ABCA4P78363 2273 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 RGS10O43665 173 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 MT-ND5P03915 603 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 BMP4P12644 408 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 CFL1P23528 166 aaKnown RBP16.16■□□□□ 0.18
RAB40C-207ENST00000563109 EEF1B2P24534 225 aaKnown RBP16.16■□□□□ 0.18
RAB40C-207ENST00000563109 EVX1P49640 407 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 KRTAP10-9P60411 292 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 SLC35A2P78381 396 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 MFGE8Q08431 387 aaPredicted RBP16.16■□□□□ 0.18
RAB40C-207ENST00000563109 MOGQ16653 247 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 GFOD2Q3B7J2 385 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 GLYATL3Q5SZD4 288 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 FBXW12Q6X9E4 464 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 PBOV1Q9GZY1 135 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 RGCCQ9H4X1 137 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 NUFIP1Q9UHK0 495 aaKnown RBP16.16■□□□□ 0.18
RAB40C-207ENST00000563109 FBXO9Q9UK97 447 aaPredicted RBP16.16■□□□□ 0.18
RAB40C-207ENST00000563109 OR52A1Q9UKL2 312 aa16.16■□□□□ 0.18
RAB40C-207ENST00000563109 LAMP3Q9UQV4 416 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms