RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 NAA40Q86UY6 237 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 BBS1Q8NFJ9 593 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 ST7LQ8TDW4 575 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 TVP23BQ9NYZ1 205 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 TREM2Q9NZC2 230 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 SONP18583 2426 aaKnown RBP13.7□□□□□ -0.22
COMMD4-206ENST00000562610 SAC3D1A6NKF1 404 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 CLDN25C9JDP6 229 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 SELENOFO60613 162 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 ADH4P08319 380 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 IGFBP5P24593 272 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 HSD11B1P28845 292 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 IL2RGP31785 369 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 NAA10P41227 235 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-206ENST00000562610 PRKXP51817 358 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 ACTR3P61158 418 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 ESRRGP62508 458 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 PTGES3Q15185 160 aaKnown RBP13.7□□□□□ -0.22
COMMD4-206ENST00000562610 AVPI1Q5T686 147 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 Q6ZR03 302 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 COLCA1Q6ZS62 124 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 MRPL21Q7Z2W9 205 aaKnown RBP13.7□□□□□ -0.22
COMMD4-206ENST00000562610 ZNF283Q8N7M2 679 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 CENPNQ96H22 339 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-206ENST00000562610 ZNF582Q96NG8 517 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-206ENST00000562610 KCNJ15Q99712 375 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 ENOPH1Q9UHY7 261 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 OAZ3Q9UMX2 235 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 N6AMT1Q9Y5N5 214 aa13.7□□□□□ -0.22
COMMD4-206ENST00000562610 LOC100289279A0A1B0GTE1 492 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 CD55P08174 381 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 SLC2A1P11166 492 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 SELEP16581 610 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 OTX1P32242 354 aaPredicted RBP13.69□□□□□ -0.22
COMMD4-206ENST00000562610 SLC15A1P46059 708 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 TMEM33P57088 247 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 GRB2P62993 217 aaKnown RBP13.69□□□□□ -0.22
COMMD4-206ENST00000562610 MVKQ03426 396 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 CDK5R2Q13319 367 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 APOFQ13790 326 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 GK2Q14410 553 aaPredicted RBP13.69□□□□□ -0.22
COMMD4-206ENST00000562610 SNAI3Q3KNW1 292 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 SPRNQ5BIV9 151 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 LCN1P1Q5VSP4 162 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 KDM4DQ6B0I6 523 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 FAM166AQ6J272 317 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 DRAM2Q6UX65 266 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 SHFQ7M4L6 423 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 TIGD4Q8IY51 512 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 OR10AD1Q8NGE0 317 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 CLDND2Q8NHS1 167 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 CCL17Q92583 94 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 MSI2Q96DH6 328 aaKnown RBP13.69□□□□□ -0.22
COMMD4-206ENST00000562610 SOX7Q9BT81 388 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 ABHD6Q9BV23 337 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 MARCH7Q9H992 704 aa13.69□□□□□ -0.22
COMMD4-206ENST00000562610 NIPBLQ6KC79 2804 aaeCLIP13.69□□□□□ -0.22
COMMD4-206ENST00000562610 IQCF6A8MYZ5 107 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 M0R129 80 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 TNFRSF1AP19438 455 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 CX3CR1P49238 355 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 SLC35D3Q5M8T2 416 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 PGAP1Q75T13 922 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 OR8G5Q8NG78 346 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 OR2AE1Q8NHA4 323 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 ITLN1Q8WWA0 313 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 HPS1Q92902 700 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 TIMD4Q96H15 378 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 OR2V2Q96R30 315 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 CIB1Q99828 191 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 DNAJC27Q9NZQ0 273 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 KCNS2Q9ULS6 477 aa13.68□□□□□ -0.22
COMMD4-206ENST00000562610 ISPDA4D126 451 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 WNT9BO14905 357 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 TBX1O43435 398 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 PRKYO43930 277 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 TGFAP01135 160 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 ANXA2P07355 339 aaKnown RBP13.67□□□□□ -0.22
COMMD4-206ENST00000562610 LYNP07948 512 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 MRPL3P09001 348 aaKnown RBP13.67□□□□□ -0.22
COMMD4-206ENST00000562610 H2BFMP0C1H6 154 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 SLC2A5P22732 501 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 ANOS1P23352 680 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 EPHA2P29317 976 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 GLYATL3Q5SZD4 288 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 SLX4IPQ5VYV7 408 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 ZFP1Q6P2D0 407 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 OR13G1Q8NGZ3 307 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 OTOSQ8NHW6 89 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 THEM6Q8WUY1 208 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 RNF133Q8WVZ7 376 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 RAB1CQ92928 201 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 RAB3IPQ96QF0 476 aaPredicted RBP13.67□□□□□ -0.22
COMMD4-206ENST00000562610 AMELYQ99218 206 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 PKP2Q99959 881 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 TOR3AQ9H497 397 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 RIBC2Q9H4K1 309 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 IL19Q9UHD0 177 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 WIPI2Q9Y4P8 454 aa13.67□□□□□ -0.22
COMMD4-206ENST00000562610 ANK3Q12955 4377 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms