RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 GSTM3P21266 225 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 CEACAM6P40199 344 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 TRAM2Q15035 370 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 PLET1Q6UQ28 207 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 TIFABQ6ZNK6 161 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 ABHD13Q7L211 337 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 SSX9Q7RTT3 188 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 TMEM150AQ86TG1 271 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 PCP2Q8IVA1 136 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 ENTHD1Q8IYW4 607 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 OR52E5Q8NH55 327 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 ZNF596Q8TC21 504 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 CREB3L1Q96BA8 519 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 GSDMAQ96QA5 445 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 XPO6Q96QU8 1125 aaKnown RBP3.95□□□□□ -1.78
SMG1-204ENST00000561940 UCK2Q9BZX2 261 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 ELOVL6Q9H5J4 265 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 ABCC6O95255 1503 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 MAPK8IP3Q9UPT6 1336 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 ADAMTS7Q9UKP4 1686 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 VIRMAQ69YN4 1812 aaKnown RBP3.94□□□□□ -1.78
SMG1-204ENST00000561940 TRAV25A0A0B4J276 109 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 KBTBD11-OT1A0A1B0GTJ5 212 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 LRRIQ4A6NIV6 560 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 SUPT3HB4E1H0 165 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 SLC9A3R1O14745 358 aaPredicted RBP3.94□□□□□ -1.78
SMG1-204ENST00000561940 ANGPTL7O43827 346 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 GABARAPO95166 117 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 RAB3DO95716 219 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 CD160O95971 181 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 ARG1P05089 322 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 ZNF823P16415 610 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 HMOX2P30519 316 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 CEACAM3P40198 252 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 SLC1A2P43004 574 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 UCNP55089 124 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 UBE2MP61081 183 aaKnown RBP3.94□□□□□ -1.78
SMG1-204ENST00000561940 RCAN2Q14206 197 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 CEMP1Q6PRD7 247 aaPredicted RBP3.94□□□□□ -1.78
SMG1-204ENST00000561940 C12orf54Q6X4T0 127 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 Q8N9L7 120 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 TTC29Q8NA56 475 aaPredicted RBP3.94□□□□□ -1.78
SMG1-204ENST00000561940 OR9G4Q8NGQ1 327 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 OR5K2Q8NHB8 316 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 MICU1Q9BPX6 476 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 NOX3Q9HBY0 568 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 CLN8Q9UBY8 286 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 CRYBG1Q9Y4K1 1723 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 UBN2Q6ZU65 1347 aa3.94□□□□□ -1.78
SMG1-204ENST00000561940 PALLDQ8WX93 1383 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 LYRM9A8MSI8 78 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 CCNB2O95067 398 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 EIF4EP06730 217 aaKnown RBP3.93□□□□□ -1.78
SMG1-204ENST00000561940 UBTFL6P0CB48 400 aaPredicted RBP3.93□□□□□ -1.78
SMG1-204ENST00000561940 RGNQ15493 299 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 PSMD5Q16401 504 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 GPR107Q5VW38 600 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 TTC23LQ6PF05 361 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 FBXW12Q6X9E4 464 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 ZFP2Q6ZN57 461 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 FAM92BQ6ZTR7 304 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 COMMD1Q8N668 190 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 OR10G4Q8NGN3 311 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 LYRM4Q9HD34 91 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 ACP6Q9NPH0 428 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 UVRAGQ9P2Y5 699 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 KCNE3Q9Y6H6 103 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 PIK3C2GO75747 1445 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 CPSF1Q10570 1443 aaKnown RBP3.93□□□□□ -1.78
SMG1-204ENST00000561940 DOCK9Q9BZ29 2069 aa3.93□□□□□ -1.78
SMG1-204ENST00000561940 TRIOBPQ9H2D6 2365 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 CACNA1AO00555 2505 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 IGHV3-74A0A0B4J1X5 117 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 IGHV3-66A0A0C4DH42 116 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 GOLGA8TH3BQL2 631 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 AKR7A2O43488 359 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 FLOT1O75955 427 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 TUBG1P23258 451 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 RPS9P46781 194 aaKnown RBP3.92□□□□□ -1.78
SMG1-204ENST00000561940 TCP10Q12799 353 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 PON2Q15165 354 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 XKR4Q5GH76 650 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 CBLN2Q8IUK8 224 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 FAM86B1Q8N7N1 296 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 OR10AD1Q8NGE0 317 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 OR56A4Q8NGH8 313 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 DNAJC1Q96KC8 554 aaKnown RBP3.92□□□□□ -1.78
SMG1-204ENST00000561940 SLC25A2Q9BXI2 301 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 LINC00597Q9H2U6 94 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 IFI27L2Q9H2X8 130 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 NCOR1P1Q9H4R4 102 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 CRLF2Q9HC73 371 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 MRPS30Q9NP92 439 aaKnown RBP3.92□□□□□ -1.78
SMG1-204ENST00000561940 TUBG2Q9NRH3 451 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 TBX21Q9UL17 535 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 ARID1AO14497 2285 aa3.92□□□□□ -1.78
SMG1-204ENST00000561940 BTAF1O14981 1849 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 KCNE1BA0A087WTH5 132 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 IGHV5-51A0A0C4DH38 117 aa3.91□□□□□ -1.78
SMG1-204ENST00000561940 NCBP2LA6PVI3 153 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms