RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 SRMP19623 302 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 RAB3BP20337 219 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 EPHA1P21709 976 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 MSR1P21757 451 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 MYL9P24844 172 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 CFPP27918 469 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 S100A5P33763 92 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 PPP3R1P63098 170 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 ARG2P78540 354 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 MRPS34P82930 218 aaKnown RBP5.74□□□□□ -1.49
CAPN3-210ENST00000561817 RIN1Q13671 783 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 SLC10A1Q14973 349 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 OXA1LQ15070 435 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 DEFB109BQ30KR1 87 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 KRTAP27-1Q3LI81 207 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 HSD17B12Q53GQ0 312 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 RIPPLY2Q5TAB7 128 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 OR7E24Q6IFN5 339 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 DCDC5Q6ZRR9 648 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 FCRLAQ7L513 359 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 PRSS45Q7RTY3 260 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 SLC22A16Q86VW1 577 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 LYPD6Q86Y78 171 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 UBQLNLQ8IYU4 475 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 OR10H5Q8NGA6 315 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 ABHD3Q8WU67 409 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 ACOT12Q8WYK0 555 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 AP3S1Q92572 193 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 ABTB1Q969K4 478 aaPredicted RBP5.74□□□□□ -1.49
CAPN3-210ENST00000561817 WDYHV1Q96HA8 205 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 ZNF416Q9BWM5 594 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 C1orf198Q9H425 327 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 OBP2BQ9NPH6 170 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 DDX28Q9NUL7 540 aaKnown RBP5.74□□□□□ -1.49
CAPN3-210ENST00000561817 DKK4Q9UBT3 224 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 N6AMT1Q9Y5N5 214 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 ATP23Q9Y6H3 246 aa5.74□□□□□ -1.49
CAPN3-210ENST00000561817 URB1O60287 2271 aaKnown RBP5.73□□□□□ -1.49
CAPN3-210ENST00000561817 LINC00854A0A1B0GVQ3 168 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 ISPDA4D126 451 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 ZNF724A8MTY0 619 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 UBE2CO00762 179 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 RER1O15258 196 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 TXNL1O43396 289 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 SLC43A1O75387 559 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 PAHP00439 452 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 IGLV3-1P01715 115 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 TTRP02766 147 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 ACSM4P0C7M7 580 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 NR2C1P13056 603 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 ELK1P19419 428 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 NPR2P20594 1047 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 ACHEP22303 614 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 PTBP1P26599 531 aaKnown RBP eCLIP5.73□□□□□ -1.49
CAPN3-210ENST00000561817 MAPK3P27361 379 aaPredicted RBP5.73□□□□□ -1.49
CAPN3-210ENST00000561817 OTX1P32242 354 aaPredicted RBP5.73□□□□□ -1.49
CAPN3-210ENST00000561817 UCNP55089 124 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 PMP22Q01453 160 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 PLGLB1Q02325 96 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 STK11Q15831 433 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 ZNF181Q2M3W8 571 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 SPANXN2Q5MJ10 180 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 PDSS1Q5T2R2 415 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 DDI2Q5TDH0 399 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 FAM27BQ5VT28 67 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 STEAP3Q658P3 488 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 FAM166AQ6J272 317 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 ZNF529Q6P280 563 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 CNIH2Q6PI25 160 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 METAP1DQ6UB28 335 aaPredicted RBP5.73□□□□□ -1.49
CAPN3-210ENST00000561817 PLXDC2Q6UX71 529 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 IGFL3Q6UXB1 125 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 STAC2Q6ZMT1 411 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 Q6ZSR3 168 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 AAED1Q7RTV5 226 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 ADGRE4PQ86SQ3 457 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 LIX1LQ8IVB5 337 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 SIAH3Q8IW03 269 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 ELMOD2Q8IZ81 293 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 CENPSQ8N2Z9 138 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 ZNF676Q8N7Q3 588 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 DRAXINQ8NBI3 349 aaPredicted RBP5.73□□□□□ -1.49
CAPN3-210ENST00000561817 TMEM178AQ8NBL3 297 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 OR5H6Q8NGV6 325 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 OR6N1Q8NGY5 312 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 CPT1CQ8TCG5 803 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 GPR148Q8TDV2 347 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 ASB5Q8WWX0 329 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 PNPLA2Q96AD5 504 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 FBXO17Q96EF6 278 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 CCDC32Q9BV29 185 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 LINC00470Q9BZP3 86 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 DEFB127Q9H1M4 99 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 NELFAQ9H3P2 528 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 NCOR1P1Q9H4R4 102 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 C7orf69Q9H7B7 122 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 SEC61A2Q9H9S3 476 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 BCO1Q9HAY6 547 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 GPR35Q9HC97 309 aa5.73□□□□□ -1.49
CAPN3-210ENST00000561817 TIGARQ9NQ88 270 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms