RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 EBPQ15125 230 aaKnown RBP16.73■□□□□ 0.27
RAB40C-206ENST00000561781 TMEM268Q5VZI3 342 aa16.73■□□□□ 0.27
RAB40C-206ENST00000561781 ZNF764Q96H86 408 aaPredicted RBP16.73■□□□□ 0.27
RAB40C-206ENST00000561781 SIGLEC7Q9Y286 467 aa16.73■□□□□ 0.27
RAB40C-206ENST00000561781 V9GYS6 101 aa16.73■□□□□ 0.27
RAB40C-206ENST00000561781 CYB5BO43169 146 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 PDX1P52945 283 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 ERVFC1-1P60608 527 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 ADAM8P78325 824 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 DUSP2Q05923 314 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 TMEM64Q6YI46 380 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 OR13C3Q8NGS6 347 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 SFXN5Q8TD22 340 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 TMEM239Q8WW34 195 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 SHDQ96IW2 340 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 SLC6A7Q99884 636 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 CNTNAP3Q9BZ76 1288 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 NELFAQ9H3P2 528 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 PARD6AQ9NPB6 346 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 PLAGL1Q9UM63 463 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 PUS1Q9Y606 427 aaKnown RBP eCLIP16.72■□□□□ 0.27
RAB40C-206ENST00000561781 OTOL1A6NHN0 477 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-206ENST00000561781 ZNF705GA8MUZ8 300 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-206ENST00000561781 CDRT15L2A8MXV6 281 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 RAB27BO00194 218 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 ZNF354AO60765 605 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-206ENST00000561781 PET100P0DJ07 73 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 OR3A1P47881 315 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 SOHLH1Q5JUK2 328 aa16.72■□□□□ 0.27
RAB40C-206ENST00000561781 TCEAL2Q9H3H9 227 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-206ENST00000561781 FAM212BQ9NTI7 297 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-206ENST00000561781 LNP1A1A4G5 178 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 AFF3P51826 1226 aaKnown RBP16.71■□□□□ 0.27
RAB40C-206ENST00000561781 ARSJQ5FYB0 599 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-206ENST00000561781 ZNF573Q86YE8 665 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 CPEB3Q8NE35 698 aaKnown RBP16.71■□□□□ 0.27
RAB40C-206ENST00000561781 OR51D1Q8NGF3 324 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 ICAM5Q9UMF0 924 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 ZNF443Q9Y2A4 671 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-206ENST00000561781 A0A1W2PS29 197 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 OR5AC1P0C628 307 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 C8orf89P0DMQ9 161 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 AKT2P31751 481 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 FAM3AP98173 230 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 ZP2Q05996 745 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 LMAN2Q12907 356 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 GGTLC2Q14390 218 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 RAB35Q15286 201 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 ZNF77Q15935 545 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 HAGHQ16775 308 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 TMPPEQ6ZT21 453 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 MTSS1LQ765P7 747 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 SNIP1Q8TAD8 396 aaKnown RBP16.71■□□□□ 0.27
RAB40C-206ENST00000561781 ABHD5Q8WTS1 349 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 SLC25A43Q8WUT9 341 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-206ENST00000561781 FRZBQ92765 325 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 BPIFA2Q96DR5 249 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 GNRHR2Q96P88 292 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 OR2AG1Q9H205 316 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 SMDT1Q9H4I9 107 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 HS3ST3B1Q9Y662 390 aa16.71■□□□□ 0.27
RAB40C-206ENST00000561781 MDC1Q14676 2089 aaKnown RBP16.71■□□□□ 0.26
RAB40C-206ENST00000561781 NDUFS4O43181 175 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 JTBO76095 146 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 NSA2O95478 260 aaKnown RBP16.7■□□□□ 0.26
RAB40C-206ENST00000561781 GAPDHP04406 335 aaKnown RBP16.7■□□□□ 0.26
RAB40C-206ENST00000561781 CD70P32970 193 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 SOX2P48431 317 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 ARRB1P49407 418 aaPredicted RBP16.7■□□□□ 0.26
RAB40C-206ENST00000561781 ZNF136P52737 540 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 RBX1P62877 108 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 TMEM183AQ8IXX5 376 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 NRTNQ99748 197 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 PLA2G2EQ9NZK7 142 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 OR5AC2Q9NZP5 309 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 MAS1P04201 325 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 CD37P11049 281 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 CFPP27918 469 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 RASGEF1BQ0VAM2 473 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 ZNF836Q6ZNA1 936 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 SLC35D2Q76EJ3 337 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 OR56A1Q8NGH5 318 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 ZNF417Q8TAU3 575 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 MYOFQ9NZM1 2061 aa16.7■□□□□ 0.26
RAB40C-206ENST00000561781 TRDCB7Z8K6 153 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 CDC14BO60729 498 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 ERCC1P07992 297 aaPredicted RBP16.69■□□□□ 0.26
RAB40C-206ENST00000561781 OR13C7P0DN81 318 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 NPY4RP50391 375 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 SUMF2Q8NBJ7 301 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 OR10A7Q8NGE5 316 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 OR52E2Q8NGJ4 325 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 ZNF563Q8TA94 476 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 CNRIP1Q96F85 164 aaPredicted RBP16.69■□□□□ 0.26
RAB40C-206ENST00000561781 PRAP1Q96NZ9 151 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 GPR87Q9BY21 358 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 CBLN4Q9NTU7 201 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 A0A1W2PPQ1 181 aa16.69■□□□□ 0.26
RAB40C-206ENST00000561781 TAGLN2P37802 199 aaKnown RBP16.69■□□□□ 0.26
RAB40C-206ENST00000561781 MC3RP41968 323 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms