RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 CDH10Q9Y6N8 788 aa5.97□□□□□ -1.45
SPG11-224ENST00000561268 CUBNO60494 3623 aa5.97□□□□□ -1.45
SPG11-224ENST00000561268 DOCK11Q5JSL3 2073 aa5.97□□□□□ -1.45
SPG11-224ENST00000561268 IGHV4-30-2A0A087WSY4 118 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 A0A1W2PQ09 198 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 A0A1W2PQL4 384 aaPredicted RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 NPIPB13A6NJU9 1138 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 SLC22A31A6NKX4 558 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 NPIPB4C9JG80 1138 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 INAFM1C9JVW0 142 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 MS4A18H0YCH9 400 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 M0R1B8 84 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 M0R3H8 397 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 SURF4O15260 269 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 RGS5O15539 181 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 TLX2O43763 284 aaPredicted RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 CD5LO43866 347 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 ORC5O43913 435 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 PEX14O75381 377 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 ALX3O95076 343 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 SERPINA3P01011 423 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 C1QBP02746 253 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 IGFBP1P08833 259 aaPredicted RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 FAM157BP0CG42 384 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 ZNF43P17038 809 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 TNFRSF1BP20333 461 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 MYL9P24844 172 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 GTF2E2P29084 291 aaKnown RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 APOBEC3AP31941 199 aaPredicted RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 PPOXP50336 477 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 ZNF133P52736 654 aaPredicted RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 CLDN17P56750 224 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 SCAND1P57086 179 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 IFITM2Q01629 132 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 LOXL1Q08397 574 aaPredicted RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 PUDPQ08623 228 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 ZP4Q12836 540 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 ZNF74Q16587 644 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 MS4A18Q3C1V0 323 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 ATAD3CQ5T2N8 411 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 C9orf135Q5VTT2 229 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 TMEM225Q6GV28 225 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 THOC7Q6I9Y2 204 aaKnown RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 SLC22A25Q6T423 547 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 KLHL24Q6TFL4 600 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 PLET1Q6UQ28 207 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 FAM131AQ6UXB0 335 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 ZNF782Q6ZMW2 699 aaPredicted RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 DEF8Q6ZN54 512 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 Q71RC1 249 aaPredicted RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 ZNF767PQ75MW2 155 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 H1FNTQ75WM6 255 aaPredicted RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 RRM2BQ7LG56 351 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 NOXA1Q86UR1 476 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 RANBP3LQ86VV4 465 aaPredicted RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 LRRC28Q86X40 367 aaPredicted RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 CCDC36Q8IYA8 594 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 C20orf196Q8IYI0 205 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 OR8H2Q8N162 312 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 FBXL14Q8N1E6 418 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 MS4A15Q8N5U1 240 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 C19orf18Q8NEA5 215 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 OR2T33Q8NG76 320 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 ANGPTL6Q8NI99 470 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 ZFAND1Q8TCF1 268 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 C15orf40Q8WUR7 153 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 LIPHQ8WWY8 451 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 OTULINQ96BN8 352 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 ZNF837Q96EG3 531 aaPredicted RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 RNFT2Q96EX2 444 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 MRPL48Q96GC5 212 aaKnown RBP5.96□□□□□ -1.46
SPG11-224ENST00000561268 RNF170Q96K19 258 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 HS6ST2Q96MM7 605 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 PRSS27Q9BQR3 290 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 SLC19A3Q9BZV2 496 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 ZCCHC4Q9H5U6 513 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 SEC61A2Q9H9S3 476 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 NOX3Q9HBY0 568 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 GPR35Q9HC97 309 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 CA10Q9NS85 328 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 TMEM160Q9NX00 188 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 ING3Q9NXR8 418 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 B3GNT2Q9NY97 397 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 TVP23BQ9NYZ1 205 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 NOX1Q9Y5S8 564 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 WNK2Q9Y3S1 2297 aa5.96□□□□□ -1.46
SPG11-224ENST00000561268 ATRQ13535 2644 aa5.95□□□□□ -1.46
SPG11-224ENST00000561268 A0A087WUU8 490 aa5.95□□□□□ -1.46
SPG11-224ENST00000561268 TRAV1-2A0A0B4J238 106 aa5.95□□□□□ -1.46
SPG11-224ENST00000561268 IGHV2OR16-5A0A0B4J2B6 119 aa5.95□□□□□ -1.46
SPG11-224ENST00000561268 PLPP3O14495 311 aa5.95□□□□□ -1.46
SPG11-224ENST00000561268 CTDSPLO15194 276 aa5.95□□□□□ -1.46
SPG11-224ENST00000561268 PLPP2O43688 288 aa5.95□□□□□ -1.46
SPG11-224ENST00000561268 CRLF1O75462 422 aa5.95□□□□□ -1.46
SPG11-224ENST00000561268 CDRT1O95170 752 aa5.95□□□□□ -1.46
SPG11-224ENST00000561268 ASAH2BP0C7U1 165 aa5.95□□□□□ -1.46
SPG11-224ENST00000561268 LIMS3P0CW19 117 aa5.95□□□□□ -1.46
SPG11-224ENST00000561268 LIMS4P0CW20 117 aa5.95□□□□□ -1.46
SPG11-224ENST00000561268 HLA-DOBP13765 273 aa5.95□□□□□ -1.46
SPG11-224ENST00000561268 CBR1P16152 277 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms