RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 OR5L1Q8NGL2 311 aa13.21□□□□□ -0.29
RABGGTA-219ENST00000560871 C10orf105Q8TEF2 133 aa13.21□□□□□ -0.29
RABGGTA-219ENST00000560871 TRUB1Q8WWH5 349 aaKnown RBP13.21□□□□□ -0.29
RABGGTA-219ENST00000560871 HAVCR1Q96D42 359 aa13.21□□□□□ -0.29
RABGGTA-219ENST00000560871 RDH12Q96NR8 316 aa13.21□□□□□ -0.29
RABGGTA-219ENST00000560871 CNN2Q99439 309 aaKnown RBP13.21□□□□□ -0.29
RABGGTA-219ENST00000560871 ADGRL4Q9HBW9 690 aa13.21□□□□□ -0.29
RABGGTA-219ENST00000560871 MYOZ1Q9NP98 299 aaPredicted RBP13.21□□□□□ -0.29
RABGGTA-219ENST00000560871 DNAJC27Q9NZQ0 273 aa13.21□□□□□ -0.29
RABGGTA-219ENST00000560871 GPR160Q9UJ42 338 aa13.21□□□□□ -0.29
RABGGTA-219ENST00000560871 COPS3Q9UNS2 423 aa13.21□□□□□ -0.29
RABGGTA-219ENST00000560871 YLPM1P49750 1951 aaKnown RBP13.21□□□□□ -0.29
RABGGTA-219ENST00000560871 NSD1Q96L73 2696 aaPredicted RBP13.21□□□□□ -0.3
RABGGTA-219ENST00000560871 PRR32B1ATL7 298 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 CASQ2O14958 399 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 HPXP02790 462 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 LCATP04180 440 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 ERCC1P07992 297 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 ADH4P08319 380 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 GABRB1P18505 474 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 HTR1FP30939 366 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 CX3CR1P49238 355 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 HCCSP53701 268 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 DSCR9P59020 149 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 GK2Q14410 553 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 LPCAT4Q643R3 524 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 CLEC2AQ6UVW9 174 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 PRSS45Q7RTY3 260 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 RFLNBQ8N5W9 214 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 THEM6Q8WUY1 208 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 UBE2FQ969M7 185 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 CMBLQ96DG6 245 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 ZNF582Q96NG8 517 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 RHNO1Q9BSD3 238 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 CYSLTR2Q9NS75 346 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 IMPAD1Q9NX62 359 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 NKIRAS2Q9NYR9 191 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 WARS2Q9UGM6 360 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 LAMP5Q9UJQ1 280 aa13.2□□□□□ -0.3
RABGGTA-219ENST00000560871 ZANQ9Y493 2812 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 VWC2LB2RUY7 222 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 TIMM8AO60220 97 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 IGHV1-46P01743 117 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 MT-ND5P03915 603 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 SBK2P0C263 348 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 SLC2A1P11166 492 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 DAOP14920 347 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 HSD11B1P28845 292 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 LIPAP38571 399 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 SLC15A1P46059 708 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 SLC6A9P48067 706 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 ZNF81P51508 661 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 SNRPGP62308 76 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 TAF13Q15543 124 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 PCGF3Q3KNV8 242 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 FAM209AQ5JX71 171 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 SLC25A30Q5SVS4 291 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 OGFRL1Q5TC84 451 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 LRRN1Q6UXK5 716 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 Q6ZR03 302 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 ENTHD1Q8IYW4 607 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 PACRGLQ8N7B6 248 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 ZNF283Q8N7M2 679 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 FAM168AQ92567 244 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 C8orf4Q9NR00 106 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 SMPD3Q9NY59 655 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 H2AFY2Q9P0M6 372 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 LRP12Q9Y561 859 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 GMPPBQ9Y5P6 360 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 RTTNQ86VV8 2226 aa13.19□□□□□ -0.3
RABGGTA-219ENST00000560871 LOC100130705A0A1B0GUX0 176 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 PLSCR5A0PG75 271 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 IQCF6A8MYZ5 107 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 INAFM1C9JVW0 142 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 NDUFS8O00217 210 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 SLC16A6O15403 523 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 H2BFMP0C1H6 154 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 SLC25A16P16260 332 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 PDLIM4P50479 330 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 ZNF121P58317 390 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 PSMA6P60900 246 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 ROM1Q03395 351 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 TMED1Q13445 227 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 LRRC36Q1X8D7 754 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 ZMAT1Q5H9K5 638 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 GLYATL3Q5SZD4 288 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 OR2T2Q6IF00 324 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 SLC35F2Q8IXU6 374 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 ZNF786Q8N393 782 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 OR51G2Q8NGK0 314 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 OR2AE1Q8NHA4 323 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 UBASH3BQ8TF42 649 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 OR8B4Q96RC9 309 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 DCLRE1BQ9H816 532 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 MSL2Q9HCI7 577 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 FAM118AQ9NWS6 357 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 CLN6Q9NWW5 311 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 TMEM14AQ9Y6G1 99 aa13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 FN1P02751 2386 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-219ENST00000560871 CHD3Q12873 2000 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms