RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 DCLRE1CQ96SD1 692 aaKnown RBP6.85□□□□□ -1.31
LRRC28-219ENST00000560483 CIB1Q99828 191 aa6.85□□□□□ -1.31
LRRC28-219ENST00000560483 SMR3AQ99954 134 aa6.85□□□□□ -1.31
LRRC28-219ENST00000560483 PKP2Q99959 881 aa6.85□□□□□ -1.31
LRRC28-219ENST00000560483 RBM4BQ9BQ04 359 aaKnown RBP6.85□□□□□ -1.31
LRRC28-219ENST00000560483 HCAR1Q9BXC0 346 aa6.85□□□□□ -1.31
LRRC28-219ENST00000560483 EGLN1Q9GZT9 426 aa6.85□□□□□ -1.31
LRRC28-219ENST00000560483 GSX1Q9H4S2 264 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-219ENST00000560483 SAP30LQ9HAJ7 183 aa6.85□□□□□ -1.31
LRRC28-219ENST00000560483 MSL2Q9HCI7 577 aa6.85□□□□□ -1.31
LRRC28-219ENST00000560483 MYOZ1Q9NP98 299 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-219ENST00000560483 CYSLTR2Q9NS75 346 aa6.85□□□□□ -1.31
LRRC28-219ENST00000560483 MRPL22Q9NWU5 206 aaKnown RBP6.85□□□□□ -1.31
LRRC28-219ENST00000560483 IMPAD1Q9NX62 359 aa6.85□□□□□ -1.31
LRRC28-219ENST00000560483 CYB5R1Q9UHQ9 305 aa6.85□□□□□ -1.31
LRRC28-219ENST00000560483 LAMP5Q9UJQ1 280 aa6.85□□□□□ -1.31
LRRC28-219ENST00000560483 GTF2A1LQ9UNN4 478 aa6.85□□□□□ -1.31
LRRC28-219ENST00000560483 LOC390937A0A1W2PQ73 354 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 TMEM129A0AVI4 362 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 ISPDA4D126 451 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 GGT3PA6NGU5 568 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 C17orf100A8MU93 164 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 ZNF878C9JN71 531 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 ANKRD65E5RJM6 399 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 M0R129 80 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 PPIHO43447 177 aaKnown RBP6.84□□□□□ -1.31
LRRC28-219ENST00000560483 SELENOFO60613 162 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 LYNP07948 512 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 H2BFMP0C1H6 154 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 SLC2A1P11166 492 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 FOSL1P15407 271 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 ZNF250P15622 560 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 MAGEB1P43366 347 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 CX3CR1P49238 355 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 CDC42P60953 191 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 PPP2R2BQ00005 443 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 CDK5Q00535 292 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 TIGD6Q17RP2 521 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 PCGF3Q3KNV8 242 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 ZIK1Q3SY52 487 aaPredicted RBP6.84□□□□□ -1.31
LRRC28-219ENST00000560483 FAHD1Q6P587 224 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 PGAP1Q75T13 922 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 ZNF771Q7L3S4 317 aaPredicted RBP6.84□□□□□ -1.31
LRRC28-219ENST00000560483 SHFQ7M4L6 423 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 COMMD2Q86X83 199 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 ZNF540Q8NDQ6 660 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 BBS1Q8NFJ9 593 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 OR2Z1Q8NG97 314 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 SPRYD4Q8WW59 207 aaPredicted RBP6.84□□□□□ -1.31
LRRC28-219ENST00000560483 ZNRF4Q8WWF5 429 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 IGFBPL1Q8WX77 278 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 GTF3AQ92664 365 aaKnown RBP6.84□□□□□ -1.31
LRRC28-219ENST00000560483 PTP4A1Q93096 173 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 EME1Q96AY2 570 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 MARS2Q96GW9 593 aaKnown RBP6.84□□□□□ -1.31
LRRC28-219ENST00000560483 ZNF582Q96NG8 517 aaPredicted RBP6.84□□□□□ -1.31
LRRC28-219ENST00000560483 C9orf16Q9BUW7 83 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 TTTY10Q9BZA0 68 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 SLC25A19Q9HC21 320 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 S100A14Q9HCY8 104 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 TBCCD1Q9NVR7 557 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 TREM2Q9NZC2 230 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 IKZF2Q9UKS7 526 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 STARD10Q9Y365 291 aa6.84□□□□□ -1.31
LRRC28-219ENST00000560483 FLNAP21333 2647 aaKnown RBP6.84□□□□□ -1.31
LRRC28-219ENST00000560483 ACANP16112 2415 aa6.84□□□□□ -1.32
LRRC28-219ENST00000560483 TEP1Q99973 2627 aaKnown RBP6.83□□□□□ -1.32
LRRC28-219ENST00000560483 CHD3Q12873 2000 aaKnown RBP6.83□□□□□ -1.32
LRRC28-219ENST00000560483 NDUFS8O00217 210 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 EI24O14681 340 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 PRODHO43272 600 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 PRKYO43930 277 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 IGHV3-13P01766 116 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 HPXP02790 462 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 HEXAP06865 529 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 SELEP16581 610 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 USF1P22415 310 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-219ENST00000560483 LIPAP38571 399 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 GPR6P46095 362 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-219ENST00000560483 GRB2P62993 217 aaKnown RBP6.83□□□□□ -1.32
LRRC28-219ENST00000560483 TNFAIP6P98066 277 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-219ENST00000560483 PSG7Q13046 419 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 ZSCAN26Q16670 478 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 HFEQ30201 348 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 SLC35D3Q5M8T2 416 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 ZNF362Q5T0B9 420 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-219ENST00000560483 MBNL2Q5VZF2 373 aaKnown RBP6.83□□□□□ -1.32
LRRC28-219ENST00000560483 KDM4DQ6B0I6 523 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 OR2T2Q6IF00 324 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 ZBTB49Q6ZSB9 765 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 USP51Q70EK9 711 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 KRT77Q7Z794 578 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 PEG10Q86TG7 708 aaKnown RBP6.83□□□□□ -1.32
LRRC28-219ENST00000560483 PARP8Q8N3A8 854 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 CBR4Q8N4T8 237 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 FAM81AQ8TBF8 368 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 C10orf105Q8TEF2 133 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 CCL17Q92583 94 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 RDH5Q92781 318 aa6.83□□□□□ -1.32
LRRC28-219ENST00000560483 ELMOD3Q96FG2 381 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms