RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 TP53I3Q53FA7 332 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 ELFN2Q5R3F8 820 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 OR2G6Q5TZ20 316 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 XAF1Q6GPH4 301 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 CORO6Q6QEF8 472 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 ARL9Q6T311 187 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 LYPD4Q6UWN0 246 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 SPATC1Q76KD6 591 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 ZNF627Q7L945 461 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 WFDC8Q8IUA0 241 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 WDFY1Q8IWB7 410 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 C17orf78Q8N4C9 275 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 MS4A15Q8N5U1 240 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 STEAP2Q8NFT2 490 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 OR1K1Q8NGR3 316 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 MUCL1Q96DR8 90 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 PLPPR2Q96GM1 343 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 SIGLEC11Q96RL6 698 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 COMMD4Q9H0A8 199 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 OBP2BQ9NPH6 170 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 GTF2A1LQ9UNN4 478 aa10.25□□□□□ -0.77
LDLR-212ENST00000560467 TMEM269A0A1B0GVZ9 245 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 OR6C6A6NF89 314 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 CD36P16671 472 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 CELP19835 753 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 EDNRAP25101 427 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 DCTDP32321 178 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 RPS27P42677 84 aaKnown RBP10.24□□□□□ -0.77
LDLR-212ENST00000560467 ALDH3B2P48448 385 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 RGS6P49758 472 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 TPTEP56180 551 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 DBPQ10586 325 aaPredicted RBP10.24□□□□□ -0.77
LDLR-212ENST00000560467 RAB35Q15286 201 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 TSTQ16762 297 aaKnown RBP10.24□□□□□ -0.77
LDLR-212ENST00000560467 LIPNQ5VXI9 398 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 ALKBH2Q6NS38 261 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 UNQ6126/PRO20091Q6UXV3 157 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 STAC2Q6ZMT1 411 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 SATL1Q86VE3 508 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 P2RY8Q86VZ1 359 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 SKA3Q8IX90 412 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 PHC2Q8IXK0 858 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 OR1J2Q8NGS2 313 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 RNF133Q8WVZ7 376 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 THRSPQ92748 146 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 NABP1Q96AH0 204 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 ZNF837Q96EG3 531 aaPredicted RBP10.24□□□□□ -0.77
LDLR-212ENST00000560467 OR5M11Q96RB7 305 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 ATF6BQ99941 703 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 TMEM204Q9BSN7 226 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 TTTY10Q9BZA0 68 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 ISG20L2Q9H9L3 353 aaKnown RBP10.24□□□□□ -0.77
LDLR-212ENST00000560467 SLCO1C1Q9NYB5 712 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 COPS3Q9UNS2 423 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 LAMP3Q9UQV4 416 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 LHFPL6Q9Y693 200 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 DSCAMO60469 2012 aa10.24□□□□□ -0.77
LDLR-212ENST00000560467 RAI1Q7Z5J4 1906 aaPredicted RBP10.23□□□□□ -0.77
LDLR-212ENST00000560467 ACOD1A6NK06 481 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 RER1O15258 196 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 GPRIN2O60269 458 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 DOK2O60496 412 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 RAD51DO75771 328 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 SEC14L2O76054 403 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 HLA-DPB1P04440 258 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 PPP3CBP16298 524 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 CPEP16870 476 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 SLC6A9P48067 706 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 TGM4P49221 684 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 RAB1AP62820 205 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 GALK2Q01415 458 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 TPBGQ13641 420 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 ENDOGQ14249 297 aaKnown RBP10.23□□□□□ -0.77
LDLR-212ENST00000560467 CLEC12BQ2HXU8 276 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 GSG1Q2KHT4 349 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 SFRP5Q5T4F7 317 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 LIPKQ5VXJ0 399 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 LRRN1Q6UXK5 716 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 LINGO2Q7L985 606 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 BHLHA15Q7RTS1 189 aaPredicted RBP10.23□□□□□ -0.77
LDLR-212ENST00000560467 CLVS1Q8IUQ0 354 aaPredicted RBP10.23□□□□□ -0.77
LDLR-212ENST00000560467 GABRG1Q8N1C3 465 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 ZNF283Q8N7M2 679 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 ZNF676Q8N7Q3 588 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 ZNF611Q8N823 705 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 OR13F1Q8NGS4 319 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 OR1F12Q8NHA8 337 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 ST7LQ8TDW4 575 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 AKAP1Q92667 903 aaKnown RBP eCLIP10.23□□□□□ -0.77
LDLR-212ENST00000560467 BCL2L2Q92843 193 aaPredicted RBP10.23□□□□□ -0.77
LDLR-212ENST00000560467 DGCR14Q96DF8 476 aaKnown RBP10.23□□□□□ -0.77
LDLR-212ENST00000560467 KCNJ15Q99712 375 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 COQ7Q99807 217 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 ACTR6Q9GZN1 396 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 MOB1AQ9H8S9 216 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 SSR3Q9UNL2 185 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 GSTK1Q9Y2Q3 226 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 AMDHD2Q9Y303 409 aa10.23□□□□□ -0.77
LDLR-212ENST00000560467 LSM2Q9Y333 95 aaKnown RBP10.23□□□□□ -0.77
LDLR-212ENST00000560467 ABCA1O95477 2261 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms