RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 UFD1Q92890 307 aa17.74■□□□□ 0.43
PSEN1-225ENST00000560005 FOXN4Q96NZ1 517 aa17.74■□□□□ 0.43
PSEN1-225ENST00000560005 ZNF649Q9BS31 505 aa17.74■□□□□ 0.43
PSEN1-225ENST00000560005 SOX7Q9BT81 388 aa17.74■□□□□ 0.43
PSEN1-225ENST00000560005 EMC6Q9BV81 110 aa17.74■□□□□ 0.43
PSEN1-225ENST00000560005 TRIM36Q9NQ86 728 aa17.74■□□□□ 0.43
PSEN1-225ENST00000560005 PARPBPQ9NWS1 579 aa17.74■□□□□ 0.43
PSEN1-225ENST00000560005 KCNG2Q9UJ96 466 aa17.74■□□□□ 0.43
PSEN1-225ENST00000560005 OR6C65A6NJZ3 312 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 DCTN6O00399 190 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 SLC22A1O15245 554 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 CTLA4P16410 223 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 CPEP16870 476 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 APOBEC3AP31941 199 aaPredicted RBP17.73■□□□□ 0.43
PSEN1-225ENST00000560005 SRP14P37108 136 aaKnown RBP17.73■□□□□ 0.43
PSEN1-225ENST00000560005 LIPAP38571 399 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 NAA10P41227 235 aaPredicted RBP17.73■□□□□ 0.43
PSEN1-225ENST00000560005 CSNK1A1P48729 337 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 CAMK2DQ13557 499 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 HIST3H3Q16695 136 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 TSTQ16762 297 aaKnown RBP17.73■□□□□ 0.43
PSEN1-225ENST00000560005 CNPY1Q3B7I2 92 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 TEX30Q5JUR7 227 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 FBXW9Q5XUX1 488 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 ZNF485Q8NCK3 441 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 OR6N1Q8NGY5 312 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 OPALINQ96PE5 141 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 SORCS2Q96PQ0 1159 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 B3GAT2Q9NPZ5 323 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 LAMP5Q9UJQ1 280 aa17.73■□□□□ 0.43
PSEN1-225ENST00000560005 IGKV3D-15A0A087WSY6 115 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 SELENOFO60613 162 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 SLC43A1O75387 559 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 GABARAPO95166 117 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 TFP02787 698 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 LAP3P28838 519 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 ENTPD1P49961 510 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 GBX2P52951 348 aaPredicted RBP17.72■□□□□ 0.43
PSEN1-225ENST00000560005 ZNF85Q03923 595 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 EGR3Q06889 387 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 CDONQ4KMG0 1287 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 OR2G6Q5TZ20 316 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 SLC25A47Q6Q0C1 308 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 OR6N2Q8NGY6 317 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 SPRYD4Q8WW59 207 aaPredicted RBP17.72■□□□□ 0.43
PSEN1-225ENST00000560005 ZNRF4Q8WWF5 429 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 TMEM54Q969K7 222 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 TMEM45BQ96B21 275 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 C12orf43Q96C57 262 aaKnown RBP17.72■□□□□ 0.43
PSEN1-225ENST00000560005 FBXO17Q96EF6 278 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 TBX5Q99593 518 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 GLTPQ9NZD2 209 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 COA3Q9Y2R0 106 aaPredicted RBP17.72■□□□□ 0.43
PSEN1-225ENST00000560005 FLVCR1Q9Y5Y0 555 aa17.72■□□□□ 0.43
PSEN1-225ENST00000560005 LOC390937A0A1W2PQ73 354 aa17.71■□□□□ 0.43
PSEN1-225ENST00000560005 ZNF716A6NP11 495 aa17.71■□□□□ 0.43
PSEN1-225ENST00000560005 AIREO43918 545 aa17.71■□□□□ 0.43
PSEN1-225ENST00000560005 SULT1C4O75897 302 aa17.71■□□□□ 0.43
PSEN1-225ENST00000560005 TGFBR2P37173 567 aa17.71■□□□□ 0.43
PSEN1-225ENST00000560005 ZNF133P52736 654 aaPredicted RBP17.71■□□□□ 0.43
PSEN1-225ENST00000560005 TRAM1Q15629 374 aa17.71■□□□□ 0.43
PSEN1-225ENST00000560005 SLC18B1Q6NT16 456 aa17.71■□□□□ 0.43
PSEN1-225ENST00000560005 KCTD18Q6PI47 426 aaPredicted RBP17.71■□□□□ 0.43
PSEN1-225ENST00000560005 AAED1Q7RTV5 226 aa17.71■□□□□ 0.43
PSEN1-225ENST00000560005 NMD3Q96D46 503 aaKnown RBP17.71■□□□□ 0.43
PSEN1-225ENST00000560005 OR2M2Q96R28 347 aa17.71■□□□□ 0.43
PSEN1-225ENST00000560005 COQ7Q99807 217 aa17.71■□□□□ 0.43
PSEN1-225ENST00000560005 BPESC1Q9GZL8 116 aa17.71■□□□□ 0.43
PSEN1-225ENST00000560005 NDUFB11Q9NX14 153 aa17.71■□□□□ 0.43
PSEN1-225ENST00000560005 TGP01266 2768 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 TVP23AA6NH52 213 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 H3BMQ9 156 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 J3QLW9 94 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 ZNF593O00488 134 aaPredicted RBP17.7■□□□□ 0.42
PSEN1-225ENST00000560005 ZNF432O94892 652 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 KRT8P05787 483 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 ZNF19P17023 458 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 EGR1P18146 543 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 ALOX5APP20292 161 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 ZNF84P51523 738 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 GABRA6Q16445 453 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 SWI5Q1ZZU3 235 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 MST1LQ2TV78 715 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 CCDC58Q4VC31 144 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 C10orf128Q5T292 105 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 VASH1Q7L8A9 365 aaPredicted RBP17.7■□□□□ 0.42
PSEN1-225ENST00000560005 FAM220AQ7Z4H9 259 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 ZIC4Q8N9L1 334 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 SLC26A10Q8NG04 563 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 OTOSQ8NHW6 89 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 MCHR2Q969V1 340 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 APH1AQ96BI3 265 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 PTTG2Q9NZH5 202 aa17.7■□□□□ 0.42
PSEN1-225ENST00000560005 LRP5LA4QPB2 252 aa17.69■□□□□ 0.42
PSEN1-225ENST00000560005 ATP6V1G2-DDX39BF2Z307 99 aa17.69■□□□□ 0.42
PSEN1-225ENST00000560005 CD1AP06126 327 aa17.69■□□□□ 0.42
PSEN1-225ENST00000560005 QDPRP09417 244 aa17.69■□□□□ 0.42
PSEN1-225ENST00000560005 GALP22466 123 aa17.69■□□□□ 0.42
PSEN1-225ENST00000560005 FOXG1P55316 489 aaPredicted RBP17.69■□□□□ 0.42
PSEN1-225ENST00000560005 KCNMB1Q16558 191 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms