RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 MFFQ9GZY8 342 aa8.91□□□□□ -0.98
LRRC28-216ENST00000559819 ALX4Q9H161 411 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-216ENST00000559819 SDHAF3Q9NRP4 125 aa8.91□□□□□ -0.98
LRRC28-216ENST00000559819 OCIAD1Q9NX40 245 aa8.91□□□□□ -0.98
LRRC28-216ENST00000559819 ASH2LQ9UBL3 628 aa8.91□□□□□ -0.98
LRRC28-216ENST00000559819 RAB22AQ9UL26 194 aa8.91□□□□□ -0.98
LRRC28-216ENST00000559819 NOP16Q9Y3C1 178 aaKnown RBP8.91□□□□□ -0.98
LRRC28-216ENST00000559819 ASCC3Q8N3C0 2202 aaKnown RBP8.91□□□□□ -0.98
LRRC28-216ENST00000559819 C5orf63A6NC05 138 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 OR14I1A6ND48 311 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 RER1O15258 196 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 TRAF3IP2O43734 574 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 B3GALNT1O75752 331 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 ZFAND5O76080 213 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 MELTFP08582 738 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 RAB6AP20340 208 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 HSD11B1P28845 292 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 CD34P28906 385 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 EPHA8P29322 1005 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 DHPSP49366 369 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 CXADRP78310 365 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 GK2Q14410 553 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 LRRC37A5PQ49AS3 106 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 AWAT2Q6E213 333 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 RGS7BPQ6MZT1 257 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 SEC22AQ96IW7 307 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 FAM71F1Q96KD3 344 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 EDEM2Q9BV94 578 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 SELENOIQ9C0D9 397 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 KCNMB2Q9Y691 235 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 PHF3Q92576 2039 aaKnown RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 A0A0A6YYD4 124 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 ARPC4-TTLL3A0A0A6YYG9 625 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 A0A1W2PP11 408 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 METTL21EPA6NDL7 271 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 DISC1C4P0D8 188 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 LGALS8O00214 317 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 ETV2O00321 342 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 HLA-AP01891 365 aaKnown RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 RAB3AP20336 220 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 CD96P40200 585 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 CXCL12P48061 93 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 MPPED2Q15777 294 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 TMEM176BQ3YBM2 270 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 RNASE10Q5GAN6 216 aaKnown RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 SLC25A53Q5H9E4 307 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 BEX5Q5H9J7 111 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 ZNF660Q6AZW8 331 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 ABHD12BQ7Z5M8 362 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 ANGPTL5Q86XS5 388 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 SLC22A24Q8N4F4 322 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 WDSUB1Q8N9V3 476 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 RELL2Q8NC24 303 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 OR8B12Q8NGG6 310 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 ST8SIA4Q92187 359 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 FOXRED1Q96CU9 486 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-216ENST00000559819 RASL10BQ96S79 203 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 CST11Q9H112 138 aa8.9□□□□□ -0.98
LRRC28-216ENST00000559819 A0A0A6YYH2 397 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 TEX51A0A1B0GUA7 166 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 MFSD2BA6NFX1 497 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 A6NJ64 397 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 RFPL4AA6NLU0 287 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 RFPL4AL1F8VTS6 287 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 SSX5O60225 188 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 IGHG1P01857 330 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 PMP2P02689 132 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 ZNF20P17024 532 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 HRH1P35367 487 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 OR3A4PP47883 348 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 ZNF121P58317 390 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-216ENST00000559819 PPP1R1AQ13522 171 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 ATXN7L3Q14CW9 347 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-216ENST00000559819 TAF13Q15543 124 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 THEM4Q5T1C6 240 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 CDH26Q8IXH8 852 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 ZNF101Q8IZC7 436 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 BEST3Q8N1M1 668 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 ADAD2Q8NCV1 583 aaKnown RBP8.89□□□□□ -0.99
LRRC28-216ENST00000559819 TMEM104Q8NE00 496 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 OR2AJ1Q8NGZ0 328 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 SCARB1Q8WTV0 552 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 PTX4Q96A99 478 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 DEFB126Q9BYW3 111 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 SLCO5A1Q9H2Y9 848 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 TUBAL3A6NHL2 446 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 E9PLN8 166 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 TOX3O15405 576 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-216ENST00000559819 BPNT1O95861 308 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 RLN2P04090 185 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 QDPRP09417 244 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 ZNF93P35789 620 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-216ENST00000559819 GPR85P60893 370 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 RSPO4Q2I0M5 234 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-216ENST00000559819 PHF19Q5T6S3 580 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 SLC25A47Q6Q0C1 308 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 GLIPR1L1Q6UWM5 242 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 FAM57BQ71RH2 274 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 RHOUQ7L0Q8 258 aa8.89□□□□□ -0.99
LRRC28-216ENST00000559819 GLRX5Q86SX6 157 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms