RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 ATF6BQ99941 703 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 PRO3102Q9H379 93 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 SSX5O60225 188 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 RGS11O94810 467 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 B4GALT1P15291 398 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 OR10A3P58181 314 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 CFHR1Q03591 330 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 LTBQ06643 244 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 PRSS53Q2L4Q9 553 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 EMC4Q5J8M3 183 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 RPL22L1Q6P5R6 122 aaKnown RBP9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 SYT9Q86SS6 491 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 DNAAF1Q8NEP3 725 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 OR13C9Q8NGT0 318 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 MARVELD1Q9BSK0 173 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 NKX6-2Q9C056 277 aaPredicted RBP9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 ING1Q9UK53 422 aaPredicted RBP9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 V9GYH0 126 aa9.56□□□□□ -0.88
CARMIL3-202ENST00000559694 POLEQ07864 2286 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 TSPAN15O95858 294 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 HLA-AP01891 365 aaKnown RBP9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 SPIN3Q5JUX0 258 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 RELL2Q8NC24 303 aaPredicted RBP9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 FNDC9Q8TBE3 224 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 NDRG3Q9UGV2 375 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 ROS1P08922 2347 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 BORCS7-ASMTA0A0B4J1R7 106 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 ERVH48-1M5A8F1 160 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 GIPP09681 153 aaPredicted RBP9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 LAP3P28838 519 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 DYRK1AQ13627 763 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 SLC35D3Q5M8T2 416 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 AVPI1Q5T686 147 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 OR2A2Q6IF42 318 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 SLC16A9Q7RTY1 509 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 CD163Q86VB7 1156 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 OR52N5Q8NH56 324 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 HSD17B8Q92506 261 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 FAM46BQ96A09 425 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 TMEM106AQ96A25 262 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 TCEAL7Q9BRU2 100 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 NRIP3Q9NQ35 241 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 FLRT3Q9NZU0 649 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 P2RY10O00398 339 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 CRTAPO75718 401 aaPredicted RBP9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 B3GALNT1O75752 331 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 CRYAAP02489 173 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 CYC1P08574 325 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 GLP1RP43220 463 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 CYCSP99999 105 aaKnown RBP9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 LIPNQ5VXI9 398 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 TMPRSS11FQ6ZWK6 438 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 MKXQ8IYA7 352 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 ZFP82Q8N141 532 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 CCDC54Q8NEL0 328 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 BBS1Q8NFJ9 593 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 OR2M7Q8NG81 312 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 OR52I2Q8NH67 350 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 C2CD4CQ8TF44 421 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 EXTL1Q92935 676 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 NINJ1Q92982 152 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 ZNF649Q9BS31 505 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 PLA2G12AQ9BZM1 189 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 NOX4Q9NPH5 578 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 NIT2Q9NQR4 276 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 LHX6Q9UPM6 363 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 SIGLEC7Q9Y286 467 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 ZNF281Q9Y2X9 895 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 PLXNA4Q9HCM2 1894 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 CENPVL1A0A0U1RR11 272 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 MAGEB4O15481 346 aaPredicted RBP9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 SNRNP70P08621 437 aaKnown RBP9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 SHBQ15464 509 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 INPP5JQ15735 1006 aaPredicted RBP9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 PLEKHN1Q494U1 663 aaPredicted RBP9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 FAM27D1Q5T7N8 215 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 PGAP1Q75T13 922 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 FAM122BQ7Z309 247 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 MOGAT1Q96PD6 335 aa9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 VRK1Q99986 396 aaPredicted RBP9.55□□□□□ -0.88
CARMIL3-202ENST00000559694 COL4A4P53420 1690 aaPredicted RBP9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 TMEM82A0PJX8 343 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 GPRIN2O60269 458 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 IGKV1D-16P01601 117 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 TBC1D28Q2M2D7 210 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 TMEM88Q6PEY1 159 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 KISS1RQ969F8 398 aaPredicted RBP9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 MICU1Q9BPX6 476 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 ISYNA1Q9NPH2 558 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 TIMM10BQ9Y5J6 103 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 A0A0B4J203 849 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 A0A1W2PQD3 144 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 SULT1C2O00338 296 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 RAD52P43351 418 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 VAMP2P63027 116 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 ZNF79Q15937 498 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 CDONQ4KMG0 1287 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 SULF2Q8IWU5 870 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 MARC2Q969Z3 335 aa9.54□□□□□ -0.88
CARMIL3-202ENST00000559694 FAM131CQ96AQ9 280 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms