RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 TLE4Q04727 773 aa12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 ACSM1Q08AH1 577 aa12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 KRT74Q7RTS7 529 aa12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 KRT77Q7Z794 578 aa12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 KBTBD8Q8NFY9 601 aa12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 RORBQ92753 470 aa12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 PIK3IP1Q96FE7 263 aa12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF696Q9H7X3 374 aa12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 NUFIP1Q9UHK0 495 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 BLOC1S6Q9UL45 172 aa12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 POLQO75417 2590 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 IGLV3-9A0A075B6K5 115 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 E7EQL1 145 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 PTGES3LE9PB15 166 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 F5H5K5 113 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 H3BSA7 217 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 PSMD9O00233 223 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 RGS10O43665 173 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 LALBAP00709 142 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 MT-ND2P03891 347 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 KRT8P05787 483 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF250P15622 560 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 PCMT1P22061 227 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 TGM4P49221 684 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 CX3CR1P49238 355 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 PRKXP51817 358 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 CHN2P52757 468 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF121P58317 390 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 MRPL28Q13084 256 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF672Q499Z4 452 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 TP53I3Q53FA7 332 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 TMEM255AQ5JRV8 349 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF704Q6ZNC4 412 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 SPATC1Q76KD6 591 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 CATSPERDQ86XM0 798 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 STX19Q8N4C7 294 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 HAVCR2Q8TDQ0 301 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 SNX33Q8WV41 574 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 APOBEC3DQ96AK3 386 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 MARS2Q96GW9 593 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 NR1H4Q96RI1 486 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 MYCBPQ99417 103 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 TTTY10Q9BZA0 68 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 BCL2L14Q9BZR8 327 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 POFUT1Q9H488 388 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 MOB1AQ9H8S9 216 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 PLEKHF2Q9H8W4 249 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 CDH20Q9HBT6 801 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 ACOXLQ9NUZ1 547 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 STARD10Q9Y365 291 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 R4GMQ9 66 aa12.74□□□□□ -0.37
SNRPA1-207ENST00000559309 A0A0U1RQV5 110 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 A0A1B0GWJ7 208 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 DANCRP0C864 163 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 RAD52P43351 418 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 CCR9P51686 369 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 NANOS3P60323 173 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 GALK2Q01415 458 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 MFGE8Q08431 387 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 TBCEQ15813 527 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 SNAI3Q3KNW1 292 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 OR2G6Q5TZ20 316 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 MBNL2Q5VZF2 373 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 ALKBH2Q6NS38 261 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 FBXW12Q6X9E4 464 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 ELMOD2Q8IZ81 293 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 PRSS35Q8N3Z0 413 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 PLPP7Q8NBV4 271 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 OR52H1Q8NGJ2 320 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 NEUROG1Q92886 237 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 C4orf36Q96KX1 117 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 COG8Q96MW5 612 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 CA10Q9NS85 328 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 ST6GALNAC2Q9UJ37 374 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 IKZF2Q9UKS7 526 aa12.73□□□□□ -0.37
SNRPA1-207ENST00000559309 TMEM269A0A1B0GVZ9 245 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 E9PI62 339 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 OGG1O15527 345 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 GPRIN2O60269 458 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 TNFAIP8O95379 198 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 TTRP02766 147 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 TACSTD2P09758 323 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 MYL12AP19105 171 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 CCL1P22362 96 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 HSD11B1P28845 292 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 THBS4P35443 961 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 KIR3DL2P43630 455 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 ERVS71-1P61550 626 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 BDH1Q02338 343 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 SNTB2Q13425 540 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 ADIPOQQ15848 244 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF829Q3KNS6 432 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 CCDC58Q4VC31 144 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 XAF1Q6GPH4 301 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF544Q6NX49 715 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 ARL9Q6T311 187 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 SPARTQ8N0X7 666 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 KLHL36Q8N4N3 616 aa12.72□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF283Q8N7M2 679 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms