RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, human

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-205	ENST00000559245	KCNMB1	Q16558	191 aa		13.46	□□□□□ -0.25
CDC42BPB-205	ENST00000559245	HIST2H3PS2	Q5TEC6	136 aa		13.46	□□□□□ -0.25
CDC42BPB-205	ENST00000559245	COLCA1	Q6ZS62	124 aa		13.46	□□□□□ -0.25
CDC42BPB-205	ENST00000559245	HIST2H3A	Q71DI3	136 aa		13.46	□□□□□ -0.25
CDC42BPB-205	ENST00000559245	VTCN1	Q7Z7D3	282 aa		13.46	□□□□□ -0.25
CDC42BPB-205	ENST00000559245	NUAK2	Q9H093	628 aa		13.46	□□□□□ -0.25
CDC42BPB-205	ENST00000559245	LHFPL6	Q9Y693	200 aa		13.46	□□□□□ -0.25
CDC42BPB-205	ENST00000559245	IGHV1-69D	A0A0B4J2H0	117 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245		A0A0G2JND7	137 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	SOCS2	O14508	198 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	MRAS	O14807	208 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	NDUFB2	O95178	105 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	IGHV1-69	P01742	117 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	GK2	Q14410	553 aa	Predicted RBP	13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	KCNJ8	Q15842	424 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	MEP1B	Q16820	701 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	COQ5	Q5HYK3	327 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	METTL11B	Q5VVY1	283 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	METTL21C	Q5VZV1	264 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	GPR139	Q6DWJ6	353 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	CORO6	Q6QEF8	472 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	LDLRAD3	Q86YD5	345 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	PNLDC1	Q8NA58	520 aa	Known RBP	13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	OR2T12	Q8NG77	320 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	LHX4	Q969G2	390 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	ATP6V1G3	Q96LB4	118 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	SIRPD	Q9H106	197 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	INTS9	Q9NV88	658 aa	Known RBP	13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	RNF7	Q9UBF6	113 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	RPS6KA6	Q9UK32	745 aa		13.45	□□□□□ -0.26
CDC42BPB-205	ENST00000559245		A0A0U1RQK1	487 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	ELOVL7	A1L3X0	281 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	ADAM20	O43506	726 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	IER3	P46695	156 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	CENPA	P49450	140 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	PGM2L1	Q6PCE3	622 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	PTCHD4	Q6ZW05	846 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	RRM2B	Q7LG56	351 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	ADCK1	Q86TW2	530 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	BOLL	Q8N9W6	283 aa	Known RBP	13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	SCCPDH	Q8NBX0	429 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	FAM46A	Q96IP4	442 aa	Known RBP	13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	TSSK2	Q96PF2	358 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	SMURF1	Q9HCE7	757 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	NRIP3	Q9NQ35	241 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	SIGLEC7	Q9Y286	467 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	TMEM5	Q9Y2B1	443 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	ZNF281	Q9Y2X9	895 aa		13.44	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	C3orf80	F5H4A9	247 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	LGALS8	O00214	317 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	PTP4A3	O75365	173 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	ACSM4	P0C7M7	580 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	CDKN2A	P42771	156 aa	Known RBP	13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	ARF6	P62330	175 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	COX10	Q12887	443 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	OR8B8	Q15620	311 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	KRTAP27-1	Q3LI81	207 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	GDPGP1	Q6ZNW5	385 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245		Q6ZSV7	163 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	SLCO4A1	Q96BD0	722 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	GPX7	Q96SL4	187 aa	Predicted RBP	13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	SIKE1	Q9BRV8	207 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	RASSF4	Q9H2L5	321 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	FN3KRP	Q9HA64	309 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	IER3IP1	Q9Y5U9	82 aa		13.43	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	BBIP1	A8MTZ0	92 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245		F5H5K5	113 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	DCTN6	O00399	190 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	NDUFA2	O43678	99 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	EDF1	O60869	148 aa	Known RBP	13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	ZNF682	O95780	498 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	LCAT	P04180	440 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	CA6	P23280	308 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	MALL	Q13021	153 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	OR8G1	Q15617	311 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	C2orf68	Q2NKX9	166 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	IFI44L	Q53G44	452 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	DNM1P34	Q6PK57	102 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	PGAP1	Q75T13	922 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	NAA40	Q86UY6	237 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	PDZD9	Q8IXQ8	264 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	SLC7A13	Q8TCU3	470 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	DPAGT1	Q9H3H5	408 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	TRIM36	Q9NQ86	728 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	GID8	Q9NWU2	228 aa		13.42	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	TRAV38-1	A0A0B4J264	116 aa		13.41	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	OOEP	A6NGQ2	149 aa		13.41	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	PTBP3	O95758	552 aa	Known RBP	13.41	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	CRABP1	P29762	137 aa		13.41	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	KLF10	Q13118	480 aa		13.41	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	FBLN7	Q53RD9	439 aa		13.41	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	HIST2H2BD	Q6DRA6	164 aa		13.41	□□□□□ -0.26
CDC42BPB-205	ENST00000559245	CFAP77	Q6ZQR2	320 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms