RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 OR9Q1Q8NGQ5 310 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 OR2AE1Q8NHA4 323 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 POP5Q969H6 163 aaKnown RBP11.32□□□□□ -0.6
VPS18-203ENST00000558855 ATF6BQ99941 703 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 RBM4Q9BWF3 364 aaKnown RBP11.32□□□□□ -0.6
VPS18-203ENST00000558855 CDADC1Q9BWV3 514 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 NDEL1Q9GZM8 345 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 TUBG2Q9NRH3 451 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 CTSZQ9UBR2 303 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 MAGEL2Q9UJ55 1249 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 LYVE1Q9Y5Y7 322 aa11.32□□□□□ -0.6
VPS18-203ENST00000558855 TCRBV5S2A0A599 114 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 C3orf80F5H4A9 247 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 J3QW42 95 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 FAM20BO75063 409 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 RENP00797 406 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 FABP3P05413 133 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 CLUP10909 449 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 TSPAN31Q12999 210 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 KRT72Q14CN4 511 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 ZNF404Q494X3 552 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 DNM1P34Q6PK57 102 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 CYP2R1Q6VVX0 501 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 ZNF841Q6ZN19 808 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 OR13G1Q8NGZ3 307 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 OR4Q3Q8NH05 313 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 SLCO4A1Q96BD0 722 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 NSMCE2Q96MF7 247 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 COG8Q96MW5 612 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 ZNF582Q96NG8 517 aaPredicted RBP11.31□□□□□ -0.6
VPS18-203ENST00000558855 PITX2Q99697 317 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 SSBP3Q9BWW4 388 aaPredicted RBP11.31□□□□□ -0.6
VPS18-203ENST00000558855 PPP1R3EQ9H7J1 279 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 IL1RAPQ9NPH3 570 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 UFSP2Q9NUQ7 469 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 NUP50Q9UKX7 468 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 PCDHGB1Q9Y5G3 927 aa11.31□□□□□ -0.6
VPS18-203ENST00000558855 IGHV2-70DA0A0C4DH43 119 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 C22orf46C9J442 243 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 SURF4O15260 269 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 WIPF1O43516 503 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 GYPBP06028 91 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 SLC2A1P11166 492 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 RPS2P15880 293 aaKnown RBP11.3□□□□□ -0.6
VPS18-203ENST00000558855 NOS3P29474 1203 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 ELF3P78545 371 aaPredicted RBP11.3□□□□□ -0.6
VPS18-203ENST00000558855 ZNF92Q03936 586 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 SCGB2A2Q13296 93 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 ESCO2Q56NI9 601 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 DEFB107AQ8IZN7 70 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 SLC37A3Q8NCC5 494 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 GNPDA2Q8TDQ7 276 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 TAGLN3Q9UI15 199 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 LRCH1Q9Y2L9 728 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 CDH10Q9Y6N8 788 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 COMMD3-BMI1R4GMX3 469 aa11.3□□□□□ -0.6
VPS18-203ENST00000558855 TRAV40A0A0B4J280 105 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 SOX14O95416 240 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 PLATP00750 562 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 GASTP01350 101 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 LCATP04180 440 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 CA6P23280 308 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 OTX1P32242 354 aaPredicted RBP11.29□□□□□ -0.6
VPS18-203ENST00000558855 GATA4P43694 442 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 SRP9P49458 86 aaKnown RBP11.29□□□□□ -0.6
VPS18-203ENST00000558855 CRMP1Q14194 572 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 SAMD4BQ5PRF9 694 aaKnown RBP11.29□□□□□ -0.6
VPS18-203ENST00000558855 GLYATL3Q5SZD4 288 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 SLC27A4Q6P1M0 643 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 PGM2L1Q6PCE3 622 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 PIGWQ7Z7B1 504 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 PARP8Q8N3A8 854 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 FGFRL1Q8N441 504 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 TEX29Q8N6K0 151 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 C3orf56Q8N813 242 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 ZNF511Q8NB15 262 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 OR5L1Q8NGL2 311 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 HCAR1Q9BXC0 346 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 SMURF1Q9HCE7 757 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 KRCC1Q9NPI7 259 aaPredicted RBP11.29□□□□□ -0.6
VPS18-203ENST00000558855 TMEM100Q9NV29 134 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 OR5V1Q9UGF6 321 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 TMCC3Q9ULS5 477 aa11.29□□□□□ -0.6
VPS18-203ENST00000558855 M0R135 149 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 HLA-DQA2P01906 255 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 HKR1P10072 659 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 PRTN3P24158 256 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 CD200P41217 278 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 MAGEA2P43356 314 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 HMGA2P52926 109 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 SMIM11AP58511 58 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 GNB2P62879 340 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 MS4A2Q01362 244 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 ZNF181Q2M3W8 571 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 RUSC1-AS1Q66K80 236 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 BRD3OSQ6XYD6 125 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 ZNF826PQ6ZT77 177 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 DCXRQ7Z4W1 244 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 WDR86Q86TI4 376 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 MUC20Q8N307 709 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms