RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 BRD7Q9NPI1 651 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 TUBG2Q9NRH3 451 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 DECR2Q9NUI1 292 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 LAMP5Q9UJQ1 280 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 CR1P17927 2039 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 FLNAP21333 2647 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 LOC390937A0A1W2PQ73 354 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 C5orf63A6NC05 138 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 SLC22A31A6NKX4 558 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 TBX1O43435 398 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 CDC14BO60729 498 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 IGHV1-46P01743 117 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 ANXA2P07355 339 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 RAC2P15153 192 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 SLC25A16P16260 332 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 GGTLC2Q14390 218 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 LRRC36Q1X8D7 754 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 PCGF3Q3KNV8 242 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 ZMAT1Q5H9K5 638 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 AADACL4Q5VUY2 407 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 DRAM2Q6UX65 266 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 FBXW12Q6X9E4 464 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 COLCA1Q6ZS62 124 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 Q71RC1 249 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 MRPL21Q7Z2W9 205 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 GID4Q8IVV7 300 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 ZNF454Q8N9F8 522 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 OR2AE1Q8NHA4 323 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 HAVCR1Q96D42 359 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 CYSLTR2Q9NS75 346 aa13.51□□□□□ -0.25
RABGGTA-206ENST00000558649 PSMD9O00233 223 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 ANPEPP15144 967 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 KITLGP21583 273 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 COL8A2P25067 703 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 OTX1P32242 354 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 OPRL1P41146 370 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 EFNB1P98172 346 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 GK2Q14410 553 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 TRIP10Q15642 601 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 GFOD2Q3B7J2 385 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 GLYATL3Q5SZD4 288 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 LRRN1Q6UXK5 716 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 CLEC9AQ6UXN8 241 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 USP51Q70EK9 711 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 GALNT4Q8N4A0 578 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 OR2Z1Q8NG97 314 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 BPESC1Q9GZL8 116 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 YIPF3Q9GZM5 350 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 SAP30LQ9HAJ7 183 aa13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 CGGBP1Q9UFW8 167 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 ZNF469Q96JG9 3925 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-206ENST00000558649 NDUFS8O00217 210 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 APOL3O95236 402 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 LIPAP38571 399 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 NR4A2P43354 598 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 ZNF121P58317 390 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 Q6ZR03 302 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 FAM57BQ71RH2 274 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 PGAP1Q75T13 922 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 KRT77Q7Z794 578 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 BIVMQ86UB2 503 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 SLC35F2Q8IXU6 374 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 ZNF786Q8N393 782 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 RFLNBQ8N5W9 214 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 OR10AD1Q8NGE0 317 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 OR51G2Q8NGK0 314 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 OR8J1Q8NGP2 316 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 RDH5Q92781 318 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 YIPF5Q969M3 257 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 UBE2FQ969M7 185 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 ELMOD3Q96FG2 381 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 HRASLS5Q96KN8 279 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 ZNF582Q96NG8 517 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 ADGRL4Q9HBW9 690 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 TREM2Q9NZC2 230 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 COPS3Q9UNS2 423 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 LRP12Q9Y561 859 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 GMPPBQ9Y5P6 360 aa13.49□□□□□ -0.25
RABGGTA-206ENST00000558649 IGHV1-69-2A0A0G2JMI3 117 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 LILRA1O75019 489 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 LY6G6DO95868 133 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 ALOX5APP20292 161 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 TNFAIP6P98066 277 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 ZNF92Q03936 586 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 SPRNQ5BIV9 151 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 LPCAT4Q643R3 524 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 OR8G5Q8NG78 346 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 SPRYD4Q8WW59 207 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 TBX5Q99593 518 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 EGLN1Q9GZT9 426 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 NARFLQ9H6Q4 476 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 ZNF275Q9NSD4 429 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 NKIRAS2Q9NYR9 191 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 IKZF2Q9UKS7 526 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 ZDHHC8Q9ULC8 765 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 CACNG2Q9Y698 323 aa13.48□□□□□ -0.25
RABGGTA-206ENST00000558649 A0A096LNT2 108 aa13.47□□□□□ -0.25
RABGGTA-206ENST00000558649 GGT3PA6NGU5 568 aa13.47□□□□□ -0.25
RABGGTA-206ENST00000558649 IQCF6A8MYZ5 107 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms