RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 FOXH1O75593 365 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 T-ENOLP0DO92 83 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 CLUP10909 449 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 SRP9P49458 86 aaKnown RBP10.03□□□□□ -0.8
HERC1-202ENST00000558324 TPTEP56180 551 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 MALLQ13021 153 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 SCGB2A2Q13296 93 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 MICAQ29983 383 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 SNAI3Q3KNW1 292 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 TMEM155Q4W5P6 130 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 ZNF362Q5T0B9 420 aaPredicted RBP10.03□□□□□ -0.8
HERC1-202ENST00000558324 SLC27A4Q6P1M0 643 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 COLCA1Q6ZS62 124 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 SPATC1Q76KD6 591 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 MRPL21Q7Z2W9 205 aaKnown RBP10.03□□□□□ -0.8
HERC1-202ENST00000558324 C1QL2Q7Z5L3 287 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 LNX2Q8N448 690 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 ZNF511Q8NB15 262 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 OR10G2Q8NGC3 310 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 OR10S1Q8NGN2 331 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 OR6K6Q8NGW6 343 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 ZNF418Q8TF45 676 aaPredicted RBP10.03□□□□□ -0.8
HERC1-202ENST00000558324 C22orf15Q8WYQ4 148 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 SPTSSAQ969W0 71 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 ZNF799Q96GE5 643 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 DDOQ99489 341 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 SLC30A2Q9BRI3 323 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 COPS4Q9BT78 406 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 PATZ1Q9HBE1 687 aaKnown RBP10.03□□□□□ -0.8
HERC1-202ENST00000558324 TMEM100Q9NV29 134 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 KCNG2Q9UJ96 466 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 PRPF19Q9UMS4 504 aaKnown RBP10.03□□□□□ -0.8
HERC1-202ENST00000558324 N6AMT1Q9Y5N5 214 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 STAB1Q9NY15 2570 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 C5orf63A6NC05 138 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 CEACAM18A8MTB9 384 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 HAX1O00165 279 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 RPS2P15880 293 aaKnown RBP10.02□□□□□ -0.81
HERC1-202ENST00000558324 SPI1P17947 270 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 ANOS1P23352 680 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 GATA3P23771 443 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 MDH2P40926 338 aaKnown RBP10.02□□□□□ -0.81
HERC1-202ENST00000558324 TAF13Q15543 124 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 FAM201AQ5SY85 155 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 PGAP1Q75T13 922 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 DCXRQ7Z4W1 244 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 LRRC28Q86X40 367 aaPredicted RBP10.02□□□□□ -0.81
HERC1-202ENST00000558324 TEX29Q8N6K0 151 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 IQCF1Q8N6M8 205 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 SEMA6DQ8NFY4 1073 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 OR2T33Q8NG76 320 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 OR2AE1Q8NHA4 323 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 NANPQ8TBE9 248 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 SPRYD4Q8WW59 207 aaPredicted RBP10.02□□□□□ -0.81
HERC1-202ENST00000558324 OTULINQ96BN8 352 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 ASB9Q96DX5 294 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 SLC6A7Q99884 636 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 NIPSNAP1Q9BPW8 284 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 THTPAQ9BU02 230 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 RBM4Q9BWF3 364 aaKnown RBP10.02□□□□□ -0.81
HERC1-202ENST00000558324 MMP26Q9NRE1 261 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 CENPMQ9NSP4 180 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 OPN4Q9UHM6 478 aa10.02□□□□□ -0.81
HERC1-202ENST00000558324 FAM183AA6NL82 134 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 RIIAD1A6NNX1 92 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 H3BN98 237 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 IFNGP01579 166 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 RAP2AP10114 183 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 SLC2A1P11166 492 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 ZNF3P17036 446 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 CA6P23280 308 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 FMO3P31513 532 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 ENTPD1P49961 510 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 PRKXP51817 358 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 ZNF92Q03936 586 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 ESCO2Q56NI9 601 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 PRAMEF6Q5VXH4 476 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 ADGRG5Q8IZF4 528 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 MUC20Q8N307 709 aaPredicted RBP10.01□□□□□ -0.81
HERC1-202ENST00000558324 BPIFB2Q8N4F0 458 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 C19orf18Q8NEA5 215 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 TEX47Q8TBZ9 253 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 DVL3Q92997 716 aaPredicted RBP10.01□□□□□ -0.81
HERC1-202ENST00000558324 SLAMF6Q96DU3 332 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 FEVQ99581 238 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 CHID1Q9BWS9 393 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 DGCR6LQ9BY27 220 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 MED20Q9H944 212 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 DDX28Q9NUL7 540 aaKnown RBP10.01□□□□□ -0.81
HERC1-202ENST00000558324 UFSP2Q9NUQ7 469 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 TAS2R1Q9NYW7 299 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 OR5V1Q9UGF6 321 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 BAIAP2Q9UQB8 552 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 DYSFO75923 2080 aa10.01□□□□□ -0.81
HERC1-202ENST00000558324 FBN3Q75N90 2809 aa10□□□□□ -0.81
HERC1-202ENST00000558324 DHRS12A0PJE2 317 aa10□□□□□ -0.81
HERC1-202ENST00000558324 GGT3PA6NGU5 568 aa10□□□□□ -0.81
HERC1-202ENST00000558324 LRRC30A6NM36 301 aa10□□□□□ -0.81
HERC1-202ENST00000558324 CD300LBA8K4G0 201 aa10□□□□□ -0.81
HERC1-202ENST00000558324 F5H0A9 414 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms