RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 AURKCQ9UQB9 309 aa13.63□□□□□ -0.23
RPL28-205ENST00000558131 C5orf63A6NC05 138 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 C22orf46C9J442 243 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 NDUFAB1O14561 156 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 FCN3O75636 299 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 CD200P41217 278 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 GSSP48637 474 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 GNB2P62879 340 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 TRAP1Q12931 704 aaKnown RBP13.62□□□□□ -0.23
RPL28-205ENST00000558131 DNM1P34Q6PK57 102 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 SHISA2Q6UWI4 295 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 RBMS3Q6XE24 437 aaKnown RBP13.62□□□□□ -0.23
RPL28-205ENST00000558131 FITM2Q8N6M3 262 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 C19orf18Q8NEA5 215 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 SDR9C7Q8NEX9 313 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 OR4K13Q8NH42 304 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 ZNRF4Q8WWF5 429 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 RAB40AQ8WXH6 277 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 ATF6BQ99941 703 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 CDADC1Q9BWV3 514 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 PRDM13Q9H4Q3 707 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 SRA1Q9HD15 236 aaKnown RBP13.62□□□□□ -0.23
RPL28-205ENST00000558131 CTSZQ9UBR2 303 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 MIOXQ9UGB7 285 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 FAM32AQ9Y421 112 aaKnown RBP13.62□□□□□ -0.23
RPL28-205ENST00000558131 V9GYQ6 96 aa13.62□□□□□ -0.23
RPL28-205ENST00000558131 KIR2DS1A0A191URI9 304 aa13.61□□□□□ -0.23
RPL28-205ENST00000558131 PTBP3O95758 552 aaKnown RBP13.61□□□□□ -0.23
RPL28-205ENST00000558131 SLC6A6P31641 620 aa13.61□□□□□ -0.23
RPL28-205ENST00000558131 OTX1P32242 354 aaPredicted RBP13.61□□□□□ -0.23
RPL28-205ENST00000558131 PSMB10P40306 273 aa13.61□□□□□ -0.23
RPL28-205ENST00000558131 MPPED2Q15777 294 aa13.61□□□□□ -0.23
RPL28-205ENST00000558131 PRAMEF6Q5VXH4 476 aa13.61□□□□□ -0.23
RPL28-205ENST00000558131 LYPD4Q6UWN0 246 aa13.61□□□□□ -0.23
RPL28-205ENST00000558131 LRRN1Q6UXK5 716 aa13.61□□□□□ -0.23
RPL28-205ENST00000558131 ZNF620Q6ZNG0 422 aa13.61□□□□□ -0.23
RPL28-205ENST00000558131 CELF2-AS1Q8N7Q2 184 aa13.61□□□□□ -0.23
RPL28-205ENST00000558131 DDOQ99489 341 aa13.61□□□□□ -0.23
RPL28-205ENST00000558131 MS4A7Q9GZW8 240 aaPredicted RBP13.61□□□□□ -0.23
RPL28-205ENST00000558131 UNKLQ9H9P5 680 aaKnown RBP13.61□□□□□ -0.23
RPL28-205ENST00000558131 F5H5K5 113 aa13.6□□□□□ -0.23
RPL28-205ENST00000558131 FAM20BO75063 409 aa13.6□□□□□ -0.23
RPL28-205ENST00000558131 GADD45GO95257 159 aa13.6□□□□□ -0.23
RPL28-205ENST00000558131 RPS27P42677 84 aaKnown RBP13.6□□□□□ -0.23
RPL28-205ENST00000558131 PITPNBP48739 271 aa13.6□□□□□ -0.23
RPL28-205ENST00000558131 CENPAP49450 140 aa13.6□□□□□ -0.23
RPL28-205ENST00000558131 SPIBQ01892 262 aa13.6□□□□□ -0.23
RPL28-205ENST00000558131 SNAI3Q3KNW1 292 aa13.6□□□□□ -0.23
RPL28-205ENST00000558131 WDR25Q64LD2 544 aaPredicted RBP13.6□□□□□ -0.23
RPL28-205ENST00000558131 BRD3OSQ6XYD6 125 aa13.6□□□□□ -0.23
RPL28-205ENST00000558131 DCDC5Q6ZRR9 648 aa13.6□□□□□ -0.23
RPL28-205ENST00000558131 OR8B3Q8NGG8 313 aa13.6□□□□□ -0.23
RPL28-205ENST00000558131 PYURFQ96I23 114 aa13.6□□□□□ -0.23
RPL28-205ENST00000558131 OR8B2Q96RD0 313 aa13.6□□□□□ -0.23
RPL28-205ENST00000558131 KRCC1Q9NPI7 259 aaPredicted RBP13.6□□□□□ -0.23
RPL28-205ENST00000558131 TMEM100Q9NV29 134 aa13.6□□□□□ -0.23
RPL28-205ENST00000558131 CD300AQ9UGN4 299 aa13.6□□□□□ -0.23
RPL28-205ENST00000558131 BHLHE40O14503 412 aa13.59□□□□□ -0.23
RPL28-205ENST00000558131 PHYHO14832 338 aa13.59□□□□□ -0.23
RPL28-205ENST00000558131 TNFRSF13BO14836 293 aaPredicted RBP13.59□□□□□ -0.23
RPL28-205ENST00000558131 HSD17B1P14061 328 aa13.59□□□□□ -0.23
RPL28-205ENST00000558131 MDKP21741 143 aaPredicted RBP13.59□□□□□ -0.23
RPL28-205ENST00000558131 PRDX6P30041 224 aa13.59□□□□□ -0.23
RPL28-205ENST00000558131 ZNF362Q5T0B9 420 aaPredicted RBP13.59□□□□□ -0.23
RPL28-205ENST00000558131 PGBD2Q6P3X8 592 aa13.59□□□□□ -0.23
RPL28-205ENST00000558131 BTNL3Q6UXE8 466 aa13.59□□□□□ -0.23
RPL28-205ENST00000558131 SLC25A28Q96A46 364 aa13.59□□□□□ -0.23
RPL28-205ENST00000558131 SLCO4A1Q96BD0 722 aa13.59□□□□□ -0.23
RPL28-205ENST00000558131 CMTM5Q96DZ9 223 aa13.59□□□□□ -0.23
RPL28-205ENST00000558131 PITX2Q99697 317 aa13.59□□□□□ -0.23
RPL28-205ENST00000558131 NUDT16L1Q9BRJ7 211 aaKnown RBP13.59□□□□□ -0.23
RPL28-205ENST00000558131 IFT27Q9BW83 186 aa13.59□□□□□ -0.23
RPL28-205ENST00000558131 HCAR1Q9BXC0 346 aa13.59□□□□□ -0.23
RPL28-205ENST00000558131 TMCC3Q9ULS5 477 aa13.59□□□□□ -0.23
RPL28-205ENST00000558131 LRRC30A6NM36 301 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 M0R135 149 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 ARPC2O15144 300 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 RENP00797 406 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 MMP9P14780 707 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 RRM2P31350 389 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 MSX2P35548 267 aaPredicted RBP13.58□□□□□ -0.24
RPL28-205ENST00000558131 FGF12P61328 243 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 ZNF92Q03936 586 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.58□□□□□ -0.24
RPL28-205ENST00000558131 TSPAN31Q12999 210 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 ECH1Q13011 328 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 DEFB112Q30KQ8 113 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 C1orf87Q8N0U7 546 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 OR8D4Q8NGM9 314 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 OR2AE1Q8NHA4 323 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 ERGIC1Q969X5 290 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 ZNF799Q96GE5 643 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 PLEKHA8Q96JA3 519 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 BTBD10Q9BSF8 475 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 EGLN3Q9H6Z9 239 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 SMURF1Q9HCE7 757 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 ADA2Q9NZK5 511 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 CLN8Q9UBY8 286 aa13.58□□□□□ -0.24
RPL28-205ENST00000558131 HOXA3O43365 443 aaPredicted RBP13.57□□□□□ -0.24
RPL28-205ENST00000558131 OR10H3O60404 316 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms